RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 PSMD5Q16401 504 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 DUSP6Q16828 381 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ZIK1Q3SY52 487 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 FAM153CQ494X1 144 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 NKAIN1Q4KMZ8 207 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 TMEM35AQ53FP2 167 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 PAN3Q58A45 887 aaKnown RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 KIAA1755Q5JYT7 1200 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 GPR107Q5VW38 600 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SEL1L3Q68CR1 1132 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 KRT39Q6A163 491 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 OR5M10Q6IEU7 315 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 HEPHL1Q6MZM0 1159 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ANKRD26P1Q6NSI1 321 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SHC4Q6S5L8 630 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ISLR2Q6UXK2 745 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CFAP77Q6ZQR2 320 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ARMCX2Q7L311 632 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 OTOAQ7RTW8 1153 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 TFAP2DQ7Z6R9 452 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 PRPF39Q86UA1 669 aaKnown RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 IQCHQ86VS3 1027 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 AMIGO1Q86WK6 493 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 METTL23Q86XA0 190 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 FOXP4Q8IVH2 680 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SLC35F3Q8IY50 421 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 METTL4Q8N3J2 472 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SPATA6LQ8N4H0 392 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SLC15A4Q8N697 577 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ADPRHL1Q8NDY3 354 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 C1orf162Q8NEQ5 155 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 OR2L8Q8NGY9 312 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SNAPC3Q92966 411 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 TMBIM1Q969X1 311 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 KIAA1191Q96A73 305 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CALML4Q96GE6 196 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF385AQ96PM9 386 aaKnown RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SERPINI1Q99574 410 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CDCA3Q99618 268 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 NPAS1Q99742 590 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 VKORC1Q9BQB6 163 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF577Q9BSK1 485 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 PDCD10Q9BUL8 212 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 TMEM109Q9BVC6 243 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 PHF7Q9BWX1 381 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 KRTAP1-5Q9BYS1 174 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 TRIM9Q9C026 710 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SHARPINQ9H0F6 387 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 KLHL31Q9H511 634 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 EXO5Q9H790 373 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ZMAT3Q9HA38 289 aaKnown RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ITM2CQ9NQX7 267 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 BABAM2Q9NXR7 383 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CD274Q9NZQ7 290 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 BFARQ9NZS9 450 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 MIOXQ9UGB7 285 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CLEC2DQ9UHP7 191 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ENPP5Q9UJA9 477 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 STAP1Q9ULZ2 295 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 RPH3ALQ9UNE2 315 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 HSPE1-MOB4S4R3N1 261 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 MYH7BA7E2Y1 1941 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 MIA3Q5JRA6 1907 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 MYH4Q9Y623 1939 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ADGRA3Q8IWK6 1321 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 FRYLO94915 3013 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SPEGQ15772 3267 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CNOT1A5YKK6 2376 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 C9orf170A2RU37 121 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 DENND3A2RUS2 1198 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 TUBAL3A6NHL2 446 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 CCDC154A6NI56 674 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 OR2AT4A6NND4 320 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 KPNA7A9QM74 516 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 F8VP50 259 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 H7C2Y5 167 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 I3L521 148 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 KCNK1O00180 336 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SLC30A4O14863 429 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SMAD9O15198 467 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ADAMDEC1O15204 470 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 EIF3DO15371 548 aaKnown RBP eCLIP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 RGS5O15539 181 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 PSMD3O43242 534 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 PRKYO43930 277 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 DPM1O60762 260 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF780AO75290 641 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 STX11O75558 287 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 CIB2O75838 187 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SCO1O75880 301 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 BCAS2O75934 225 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 CLPXO76031 633 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 LATS1O95835 1130 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 TTLL1O95922 423 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 PNPP00491 289 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 UGT2B4P06133 528 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 KLK3P07288 261 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 CRYGCP07315 174 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms