RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 EIF3MQ7L2H7 374 aaKnown RBP11.06□□□□□ -0.64
SHMT2-212ENST00000554467 CYP4Z1Q86W10 505 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 TRIM69Q86WT6 500 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 TRIM48Q8IWZ4 208 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 DEPDC4Q8N2C3 294 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 HORMAD2Q8N7B1 307 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 OR52N2Q8NGI0 321 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 OR5D16Q8NGK9 328 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 OR2T29Q8NH02 315 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 MS4A6EQ96DS6 147 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 RUBCNLQ9H714 662 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 UBE2ZQ9H832 354 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-212ENST00000554467 C1GALT1Q9NS00 363 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 PAK1IP1Q9NWT1 392 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-212ENST00000554467 RPS6KA6Q9UK32 745 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 CABIN1Q9Y6J0 2220 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 TRBC2A0A5B9 178 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 J3KTA2 159 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 DNAJB6O75190 326 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 SEMA3DO95025 777 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 P2RX3P56373 397 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 KCNJ10P78508 379 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 CDK6Q00534 326 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 ZNF438Q7Z4V0 828 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 NATD1Q8N6N6 113 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 ACOT4Q8N9L9 421 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 OR52E4Q8NGH9 312 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 SUN5Q8TC36 379 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 NLNQ9BYT8 704 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 MAGIXQ9H6Y5 334 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 KIR3DX1Q9H7L2 352 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 RASSF1Q9NS23 344 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 PDP1Q9P0J1 537 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-212ENST00000554467 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-212ENST00000554467 ORC6Q9Y5N6 252 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 ZNF860A6NHJ4 632 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 CDK2AP1O14519 115 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 CMPK1P30085 196 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 SERPINB1P30740 379 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 BMP8BP34820 402 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 PCGF2P35227 344 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 SLX4IPQ5VYV7 408 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 OR5K1Q8NHB7 308 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 GOT1L1Q8NHS2 421 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-212ENST00000554467 PSMA8Q8TAA3 256 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 S100ZQ8WXG8 99 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 MUL1Q969V5 352 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 FOXQ1Q9C009 403 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 CPNE5Q9HCH3 593 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 TMEM184CQ9NVA4 438 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 FAM118AQ9NWS6 357 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 RHCGQ9UBD6 479 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 TMEFF2Q9UIK5 374 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-212ENST00000554467 RABL2BQ9UNT1 228 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 A0A0A6YYD5 115 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 A0A1W2PR48 441 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 PRAMEF25A6NGN4 478 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 ZSCAN5BA6NJL1 495 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 CCRL2O00421 344 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 ARHGAP33O14559 1287 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 ZW10O43264 779 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 ASNA1O43681 348 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 CLEC3AO75596 197 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 BCHEP06276 602 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 C7P10643 843 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 F3P13726 295 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 GPC1P35052 558 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 SEPHS1P49903 392 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 VBP1P61758 197 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 OLR1P78380 273 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 BTN3A2P78410 334 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 UBXN2BQ14CS0 331 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 CTU2Q2VPK5 515 aaKnown RBP11.05□□□□□ -0.64
SHMT2-212ENST00000554467 DESI1Q6ICB0 168 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 IKBIPQ70UQ0 350 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 SPATC1Q76KD6 591 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 WDR53Q7Z5U6 358 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-212ENST00000554467 PSD4Q8NDX1 1056 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 DNASE1L2Q92874 299 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 RAB11FIP5Q9BXF6 653 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 ASPSCR1Q9BZE9 553 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 LMAN1LQ9HAT1 526 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 MAPRE3Q9UPY8 281 aa11.05□□□□□ -0.64
SHMT2-212ENST00000554467 FAM172BPA6NC97 362 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 SLC22A1O15245 554 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 CTSVO60911 334 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 NADKO95544 446 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-212ENST00000554467 APBB3O95704 486 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 TYRP1P17643 537 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 PRKACBP22694 351 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 PPIBP23284 216 aaKnown RBP11.04□□□□□ -0.64
SHMT2-212ENST00000554467 RPL3P39023 403 aaKnown RBP11.04□□□□□ -0.64
SHMT2-212ENST00000554467 MAGEA2P43356 314 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 LRRC74AQ0VAA2 488 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 ILF3Q12906 894 aaKnown RBP eCLIP11.04□□□□□ -0.64
SHMT2-212ENST00000554467 VEZF1Q14119 521 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 COL19A1Q14993 1142 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 SNAP47Q5SQN1 464 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 STEAP3Q658P3 488 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 TRIM40Q6P9F5 258 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms