RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 WISP2O76076 250 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 NADKO95544 446 aaPredicted RBP6.96□□□□□ -1.3
LINC00640-201ENST00000554409 ATP1B1P05026 303 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 FBXO45P0C2W1 286 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 CPA3P15088 417 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 CHN1P15882 459 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 CA7P43166 264 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 GSTM5P46439 218 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 HTR6P50406 440 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 NAGLUP54802 743 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 FOXA1P55317 472 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 RAE1P78406 368 aaKnown RBP6.96□□□□□ -1.3
LINC00640-201ENST00000554409 ACSM2AQ08AH3 577 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 FUT7Q11130 342 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 ZNF267Q14586 743 aaPredicted RBP6.96□□□□□ -1.3
LINC00640-201ENST00000554409 PCLAFQ15004 111 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 EBPQ15125 230 aaKnown RBP6.96□□□□□ -1.3
LINC00640-201ENST00000554409 ZNF791Q3KP31 576 aaPredicted RBP6.96□□□□□ -1.3
LINC00640-201ENST00000554409 RNFT1Q5M7Z0 435 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 LIPMQ5VYY2 423 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 FAM219BQ5XKK7 198 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 ACSM2BQ68CK6 577 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 GALNT18Q6P9A2 607 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 IL20RBQ6UXL0 311 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 C16orf47Q6ZP98 133 aaPredicted RBP6.96□□□□□ -1.3
LINC00640-201ENST00000554409 RNF165Q6ZSG1 346 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 SLC29A4Q7RTT9 530 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 TRABD2AQ86V40 505 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 HOMEZQ8IX15 550 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 GALNT12Q8IXK2 581 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 C4orf33Q8N1A6 199 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 GHDCQ8N2G8 530 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 MREGQ8N565 214 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 CCNYL1Q8N7R7 359 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 ZNF441Q8N8Z8 693 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 BANPQ8N9N5 519 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 OR7G1Q8NGA0 311 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 OR2W6PQ8NHA6 318 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 APOPT1Q96IL0 206 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 SGCZQ96LD1 299 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 KCNA7Q96RP8 456 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 HBEGFQ99075 208 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 CNPPD1Q9BV87 410 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 TMEM109Q9BVC6 243 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 FAIM2Q9BWQ8 316 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 SHCBP1LQ9BZQ2 653 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 WWTR1Q9GZV5 400 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 ZFAND3Q9H8U3 227 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 SH2D2AQ9NP31 389 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 PLEKHB1Q9UF11 243 aaPredicted RBP6.96□□□□□ -1.3
LINC00640-201ENST00000554409 ERVK-11Q9UQG0 969 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 TIMM22Q9Y584 194 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 EML6Q6ZMW3 1958 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 CROCCQ5TZA2 2017 aa6.96□□□□□ -1.3
LINC00640-201ENST00000554409 A0A1W2PS29 197 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 TLDC2A0PJX2 215 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 NPIPA5E9PKD4 350 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 NPIPB8E9PQR5 432 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 TFECO14948 347 aaPredicted RBP6.95□□□□□ -1.3
LINC00640-201ENST00000554409 PCDH7O60245 1069 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 TRIM13O60858 407 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 CLDN1O95832 211 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 CT62P0C5K7 136 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 UROSP10746 265 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 DRD2P14416 443 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 PORP16435 677 aaPredicted RBP6.95□□□□□ -1.3
LINC00640-201ENST00000554409 CSNK2A2P19784 350 aaPredicted RBP6.95□□□□□ -1.3
LINC00640-201ENST00000554409 S1PR1P21453 382 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 CNR1P21554 472 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 TIA1P31483 386 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINC00640-201ENST00000554409 XKP51811 444 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 SRSF11Q05519 484 aaKnown RBP6.95□□□□□ -1.3
LINC00640-201ENST00000554409 IFFO1Q0D2I5 559 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 ASPHQ12797 758 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 MAP4K2Q12851 820 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 PRICKLE4Q2TBC4 344 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 CFAP157Q5JU67 520 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 C6orf163Q5TEZ5 329 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 C1QL3Q5VWW1 255 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 MTFR2Q6P444 385 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 RGS9BPQ6ZS82 235 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 GK5Q6ZS86 529 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 MAMDC2Q7Z304 686 aaPredicted RBP6.95□□□□□ -1.3
LINC00640-201ENST00000554409 TRIM46Q7Z4K8 759 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 FJX1Q86VR8 437 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 SPPL2CQ8IUH8 684 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 CHERPQ8IWX8 916 aaKnown RBP6.95□□□□□ -1.3
LINC00640-201ENST00000554409 SAMD14Q8IZD0 417 aaPredicted RBP6.95□□□□□ -1.3
LINC00640-201ENST00000554409 VWA5B2Q8N398 1253 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 ZNF615Q8N8J6 731 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 CCDC63Q8NA47 563 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 C17orf47Q8NEP4 570 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 OR2M7Q8NG81 312 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 FAM76AQ8TAV0 307 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 PAQR8Q8TEZ7 354 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 TP53INP1Q96A56 240 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 KLHL29Q96CT2 875 aa6.95□□□□□ -1.3
LINC00640-201ENST00000554409 SPACA9Q96E40 222 aaPredicted RBP6.95□□□□□ -1.3
LINC00640-201ENST00000554409 CNRIP1Q96F85 164 aaPredicted RBP6.95□□□□□ -1.3
LINC00640-201ENST00000554409 APIPQ96GX9 242 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms