RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 WDR91A4D1P6 747 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 TMEM200CA6NKL6 621 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 A8MVJ9 347 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 OR2J2O76002 312 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 TGDSO95455 350 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 SLC35E2P0CK97 266 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 TROVE2P10155 538 aaKnown RBP eCLIP12.12□□□□□ -0.47
SHMT2-211ENST00000554310 ZNF24P17028 368 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 MST1P26927 711 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 PIK3R1P27986 724 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 ST13P50502 369 aaKnown RBP12.12□□□□□ -0.47
SHMT2-211ENST00000554310 TRA2BP62995 288 aaKnown RBP12.12□□□□□ -0.47
SHMT2-211ENST00000554310 MAPKAPK3Q16644 382 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 SPIN4Q56A73 249 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 CFAP157Q5JU67 520 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 TCHHL1Q5QJ38 904 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-211ENST00000554310 GFRALQ6UXV0 394 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 FRMD7Q6ZUT3 714 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 C1orf52Q8N6N3 182 aaKnown RBP12.12□□□□□ -0.47
SHMT2-211ENST00000554310 ZNF321PQ8N8H1 164 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 POGLUT1Q8NBL1 392 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 ASB15Q8WXK1 588 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 SENP5Q96HI0 755 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-211ENST00000554310 RASL10BQ96S79 203 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 ACPTQ9BZG2 426 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 C12orf65Q9H3J6 166 aaKnown RBP12.12□□□□□ -0.47
SHMT2-211ENST00000554310 MID1IP1Q9NPA3 183 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 SLCO1B3Q9NPD5 702 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 RYDENQ9NUL5 291 aaKnown RBP12.12□□□□□ -0.47
SHMT2-211ENST00000554310 OXSMQ9NWU1 459 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 HPF1Q9NWY4 346 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 VPS29Q9UBQ0 182 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 SEC14L3Q9UDX4 400 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 ERRFI1Q9UJM3 462 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-211ENST00000554310 ERVK-11Q9UQG0 969 aa12.12□□□□□ -0.47
SHMT2-211ENST00000554310 UNC79Q9P2D8 2635 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 UNC5CO95185 931 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 BPGMP07738 259 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 STSP08842 583 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 NEFHP12036 1026 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 CPA3P15088 417 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 SOX3P41225 446 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 HTR6P50406 440 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 NAGLUP54802 743 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 ERVK-8P63133 956 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 ALDH6A1Q02252 535 aaKnown RBP12.11□□□□□ -0.47
SHMT2-211ENST00000554310 MPEG1Q2M385 716 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.11□□□□□ -0.47
SHMT2-211ENST00000554310 GALNTL6Q49A17 601 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 C4orf17Q53FE4 359 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 LIPMQ5VYY2 423 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 ATG16L1Q676U5 607 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 SLC48A1Q6P1K1 146 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 OPN5Q6U736 354 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 DGAT2L6Q6ZPD8 337 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 GALNT12Q8IXK2 581 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 C9orf40Q8IXQ3 194 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 OR4K14Q8NGD5 310 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 C10orf82Q8WW14 230 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 RIT1Q92963 219 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 PPWD1Q96BP3 646 aaKnown RBP12.11□□□□□ -0.47
SHMT2-211ENST00000554310 PSMG3-AS1Q96PY0 264 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 CNPPD1Q9BV87 410 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 FAIM2Q9BWQ8 316 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 TIMMDC1Q9NPL8 285 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 MCM8Q9UJA3 840 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 ERVK-19Q9WJR5 959 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 OSGIN2Q9Y236 505 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 PCDHA9Q9Y5H5 950 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 NAV2Q8IVL1 2488 aa12.11□□□□□ -0.47
SHMT2-211ENST00000554310 SERTM1A2A2V5 107 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 OR6C76A6NM76 312 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 KLRC4-KLRK1H3BQV0 150 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 WWP2O00308 870 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 UBFD1O14562 309 aaKnown RBP12.1□□□□□ -0.47
SHMT2-211ENST00000554310 PGRMC2O15173 223 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 CRCPO75575 148 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 DCTN3O75935 186 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 DNAJC8O75937 253 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-211ENST00000554310 OR6B1O95007 311 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 LDLRP01130 860 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 CPMP14384 443 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 BGNP21810 368 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 ALDH3A1P30838 453 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 PER3P56645 1201 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 KCNK10P57789 538 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 RBPJQ06330 500 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 ACSM2AQ08AH3 577 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 ZNF267Q14586 743 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-211ENST00000554310 PCLAFQ15004 111 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 KRTCAP3Q53RY4 240 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 SPDYAQ5MJ70 313 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 C6orf163Q5TEZ5 329 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 FAM219BQ5XKK7 198 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 ACSM2BQ68CK6 577 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 GALNT18Q6P9A2 607 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 RNF111Q6ZNA4 994 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 C16orf47Q6ZP98 133 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-211ENST00000554310 RTL4Q6ZR62 310 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 SLC29A4Q7RTT9 530 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms