RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 RTTNQ86VV8 2226 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 LRRC14BA6NHZ5 514 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 FGF17O60258 216 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 LRATO95237 230 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 TGFB1P01137 390 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 CLPSP04118 112 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 PCNAP12004 261 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 ATP5A1P25705 553 aaKnown RBP10.61□□□□□ -0.71
TUBB3-204ENST00000554116 CNTFP26441 200 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 ADSLP30566 484 aaPredicted RBP10.61□□□□□ -0.71
TUBB3-204ENST00000554116 UQCRC1P31930 480 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 PEX19P40855 299 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 MAGEA12P43365 314 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 ZNF136P52737 540 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 ALDH18A1P54886 795 aaKnown RBP10.61□□□□□ -0.71
TUBB3-204ENST00000554116 PCDH1Q08174 1060 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 TGM3Q08188 693 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 E2F2Q14209 437 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 SETDB1Q15047 1291 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 LGSNQ5TDP6 509 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 PRAMEF20Q5VT98 475 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 FNDC7Q5VTL7 733 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 SLC22A10Q63ZE4 541 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 MED27Q6P2C8 311 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 OPN5Q6U736 354 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 PAMR1Q6UXH9 720 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 TRMT10CQ7L0Y3 403 aaKnown RBP10.61□□□□□ -0.71
TUBB3-204ENST00000554116 OR4N5Q8IXE1 308 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 GOT1L1Q8NHS2 421 aaPredicted RBP10.61□□□□□ -0.71
TUBB3-204ENST00000554116 NEIL3Q8TAT5 605 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 FAM222BQ8WU58 562 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 ISL2Q96A47 359 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 PPWD1Q96BP3 646 aaKnown RBP10.61□□□□□ -0.71
TUBB3-204ENST00000554116 SENP5Q96HI0 755 aaPredicted RBP10.61□□□□□ -0.71
TUBB3-204ENST00000554116 C18orf12Q96KH6 178 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 COPS7BQ9H9Q2 264 aaPredicted RBP10.61□□□□□ -0.71
TUBB3-204ENST00000554116 ZFP64Q9NPA5 681 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 ACKR4Q9NPB9 350 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 CPSF2Q9P2I0 782 aaKnown RBP10.61□□□□□ -0.71
TUBB3-204ENST00000554116 B4GALT7Q9UBV7 327 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 CNOT11Q9UKZ1 510 aaKnown RBP10.61□□□□□ -0.71
TUBB3-204ENST00000554116 PCDHGB3Q9Y5G1 929 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 TNPO3Q9Y5L0 923 aaKnown RBP10.61□□□□□ -0.71
TUBB3-204ENST00000554116 MED12LQ86YW9 2145 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 ROS1P08922 2347 aa10.61□□□□□ -0.71
TUBB3-204ENST00000554116 EXOC1LA0A1B0GW35 172 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 FAM171A2A8MVW0 826 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 TRIM49D1C9J1S8 452 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 RIPK2O43353 540 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 TRIM3O75382 744 aaPredicted RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 SCELO95171 688 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 SIX3O95343 332 aaPredicted RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 EPPINO95925 133 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 P04436 131 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 SNRPAP09012 282 aaKnown RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 RBP1P09455 135 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 FAM153BP0C7A2 387 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 COL6A2P12110 1019 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 GABRA1P14867 456 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 BMP5P22003 454 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 SOX18P35713 384 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 TRPC1P48995 793 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 CRYZQ08257 329 aaKnown RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 PCBP2Q15366 365 aaKnown RBP eCLIP10.6□□□□□ -0.712e-6■■□□□ 13.3
TUBB3-204ENST00000554116 FAM153CQ494X1 144 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 ACSF3Q4G176 576 aaPredicted RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 TECRLQ5HYJ1 363 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 LIPJQ5W064 366 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 GRHL2Q6ISB3 625 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 CHSY3Q70JA7 882 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 MYLK4Q86YV6 388 aaPredicted RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 LAS2Q8IYD9 372 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 RNF175Q8N4F7 328 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 ACOT4Q8N9L9 421 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 SRFBP1Q8NEF9 429 aaKnown RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 OR7G3Q8NG95 312 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 OR10G3Q8NGC4 313 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 NUBPLQ8TB37 319 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 ZNF473Q8WTR7 871 aaKnown RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 NANOS1Q8WY41 292 aaKnown RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 RNASE6Q93091 150 aaKnown RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 SPACA9Q96E40 222 aaPredicted RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 PHF21BQ96EK2 531 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 CMTM7Q96FZ5 175 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 KCNC2Q96PR1 638 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 TIMP4Q99727 224 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 SORBS1Q9BX66 1292 aaKnown RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 MS4A8Q9BY19 250 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 LDAHQ9H6V9 325 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 IPPKQ9H8X2 491 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 ACTR8Q9H981 624 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 LYRM4Q9HD34 91 aa10.6□□□□□ -0.71
TUBB3-204ENST00000554116 MRPS33Q9Y291 106 aaKnown RBP10.6□□□□□ -0.71
TUBB3-204ENST00000554116 SAP18O00422 153 aaKnown RBP10.59□□□□□ -0.71
TUBB3-204ENST00000554116 SMIM24O75264 130 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 SH3BGRLO75368 114 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 PRKRAO75569 313 aaKnown RBP10.59□□□□□ -0.71
TUBB3-204ENST00000554116 HEXAP06865 529 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 ABHD2P08910 425 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 INHBBP09529 407 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms