RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 GTF3C1Q12789 2109 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 FAM90A27PA6NNH2 459 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 MAGEB17A8MXT2 336 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 NPIPB8E9PQR5 432 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 ERI3O43414 337 aaKnown RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 GALR3O60755 368 aaPredicted RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 HSPA4LO95757 839 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 TGFB1P01137 390 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 TPOP07202 933 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 CHRNGP07510 517 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 ZNF888P0CJ79 500 aaPredicted RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 CHN1P15882 459 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 IL1RNP18510 177 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 DNASE1P24855 282 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 TPP2P29144 1249 aaPredicted RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 HOXC12P31275 282 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 HNRNPH1P31943 449 aaKnown RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 PEX19P40855 299 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 SLC1A6P48664 564 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 CYB561P49447 251 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 HLCSP50747 726 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 NEK2P51955 445 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 RAP1GDS1P52306 607 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 MTTPP55157 894 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 NUP107P57740 925 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 MLF1P58340 268 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 SLC26A5P58743 744 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 RPS13P62277 151 aaKnown RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 RHAGQ02094 409 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 BST1Q10588 318 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 PMPCAQ10713 525 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 MYBPHQ13203 477 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 DDX39BQ13838 428 aaKnown RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 DEFB134Q4QY38 66 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 TOR1AIP1Q5JTV8 583 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 KANK2Q63ZY3 851 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 ADNP2Q6IQ32 1131 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 ARHGAP11AQ6P4F7 1023 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 PAPD4Q6PIY7 484 aaKnown RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 TRIM46Q7Z4K8 759 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 PRIMA1Q86XR5 153 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 CCDC71Q8IV32 467 aaPredicted RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 SULF2Q8IWU5 870 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 RPRMLQ8N4K4 120 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 OR9A4Q8NGU2 314 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 OR51Q1Q8NH59 317 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 ZCCHC10Q8TBK6 192 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 RGMAQ96B86 450 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 METTL2AQ96IZ6 378 aaKnown RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 FAR2Q96K12 515 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 C18orf12Q96KH6 178 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 KCNC2Q96PR1 638 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 F2RL3Q96RI0 385 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 MTERF1Q99551 399 aaKnown RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 LPAR4Q99677 370 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 MACROD1Q9BQ69 325 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 NPLQ9BXD5 320 aaPredicted RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 POLDIP3Q9BY77 421 aaKnown RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 OR51B5Q9H339 312 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 KLHL31Q9H511 634 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 CDCP1Q9H5V8 836 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 PFDN4Q9NQP4 134 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 LANCL2Q9NS86 450 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 AHSPQ9NZD4 102 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 ADAM29Q9UKF5 820 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 KLF13Q9Y2Y9 288 aaPredicted RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 RAP2CQ9Y3L5 183 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 TRAF6Q9Y4K3 522 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 FBN1P35555 2871 aaKnown RBP7.18□□□□□ -1.26
ABCD4-220ENST00000553998 JMJD1CQ15652 2540 aa7.18□□□□□ -1.26
ABCD4-220ENST00000553998 OR2W5A6NFC9 320 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 SLCO1B7G3V0H7 640 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 KLRC4-KLRK1H3BQV0 150 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 SLC28A1O00337 649 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 ITM2AO43736 263 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 B3GALT2O43825 422 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 HS6ST1O60243 411 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 PRMT3O60678 531 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 SNNO75324 88 aaPredicted RBP7.17□□□□□ -1.26
ABCD4-220ENST00000553998 RSL1D1O76021 490 aaKnown RBP7.17□□□□□ -1.26
ABCD4-220ENST00000553998 PDYNP01213 254 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 STATHP02808 62 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 HIST1H1TP22492 207 aaPredicted RBP7.17□□□□□ -1.26
ABCD4-220ENST00000553998 ARRB2P32121 409 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 XCR1P46094 333 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 MEOX1P50221 254 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 HTR6P50406 440 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 ST13P50502 369 aaKnown RBP7.17□□□□□ -1.26
ABCD4-220ENST00000553998 RPL14P50914 215 aaKnown RBP7.17□□□□□ -1.26
ABCD4-220ENST00000553998 HK2P52789 917 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 PLA2G16P53816 162 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 FOXA1P55317 472 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 TAS2R50P59544 299 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 RAB8AP61006 207 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 BTN3A2P78410 334 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 OCRLQ01968 901 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 NSDHLQ15738 373 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 AP5B1Q2VPB7 878 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 MINDY4Q4G0A6 757 aa7.17□□□□□ -1.26
ABCD4-220ENST00000553998 SFT2D3Q587I9 215 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms