RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 MTDHQ86UE4 582 aaKnown RBP11.42□□□□□ -0.58
SHMT2-209ENST00000553949 FUNDC1Q8IVP5 155 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 GALNT12Q8IXK2 581 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 AMER2Q8N7J2 671 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 MORN4Q8NDC4 146 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 B3GNT7Q8NFL0 401 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 ADCY4Q8NFM4 1077 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 ZFP28Q8NHY6 868 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 SLC2A12Q8TD20 617 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 CNTNAP3BQ96NU0 1288 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 CNPPD1Q9BV87 410 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 CNTNAP3Q9BZ76 1288 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 NMUR2Q9GZQ4 415 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 MRGBPQ9NV56 204 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 CCDC167Q9P0B6 97 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 PPIEQ9UNP9 301 aaKnown RBP11.42□□□□□ -0.58
SHMT2-209ENST00000553949 LAMA5O15230 3695 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 PCSK5Q92824 1860 aa11.42□□□□□ -0.58
SHMT2-209ENST00000553949 PRSS51A0A1B0GVH4 220 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 A0A1W2PRB8 838 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 HRKO00198 91 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 NR5A2O00482 541 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 RNASET2O00584 256 aaKnown RBP11.41□□□□□ -0.58
SHMT2-209ENST00000553949 FCHO1O14526 889 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 SCN2BO60939 215 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 SLITRK5O94991 958 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 C6orf47O95873 294 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 CT62P0C5K7 136 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 ICAM2P13598 275 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 CD1EP15812 388 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 GPR143P51810 404 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 RRADP55042 308 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 KCNK10P57789 538 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 CXADRP78310 365 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 MRPS35P82673 323 aaKnown RBP11.41□□□□□ -0.58
SHMT2-209ENST00000553949 MAP4K2Q12851 820 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 HSPB3Q12988 150 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 RCAN2Q14206 197 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 ZNF267Q14586 743 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-209ENST00000553949 BTBD16Q32M84 506 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 C6orf163Q5TEZ5 329 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 BLOC1S3Q6QNY0 202 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 FAM111BQ6SJ93 734 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 TMEM107Q6UX40 140 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 CLECL1Q8IZS7 167 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 VWA5B2Q8N398 1253 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 TMEM102Q8N9M5 508 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-209ENST00000553949 VPS37AQ8NEZ2 397 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 OR1N1Q8NGS0 311 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 ZNF675Q8TD23 568 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 SNRNP27Q8WVK2 155 aaKnown RBP11.41□□□□□ -0.58
SHMT2-209ENST00000553949 OR5P2Q8WZ92 322 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 KAT2AQ92830 837 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 NCLNQ969V3 563 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 CTHRC1Q96CG8 243 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 SENP5Q96HI0 755 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-209ENST00000553949 FBXL20Q96IG2 436 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 ART5Q96L15 291 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 OR52E6Q96RD3 313 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 OR8D2Q9GZM6 311 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 MMP25Q9NPA2 562 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 ATP13A2Q9NQ11 1180 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 FAM120CQ9NX05 1096 aaKnown RBP11.41□□□□□ -0.58
SHMT2-209ENST00000553949 MAT2BQ9NZL9 334 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 ERVK-19Q9WJR5 959 aa11.41□□□□□ -0.58
SHMT2-209ENST00000553949 NDUFAB1O14561 156 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 CLPSP04118 112 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 IGKV3-11P04433 115 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 SERPINA7P05543 415 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 CELA2AP08217 269 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 ADSLP30566 484 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-209ENST00000553949 GPC1P35052 558 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 SOX18P35713 384 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 MC3RP41968 323 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 CDK9P50750 372 aaKnown RBP11.4□□□□□ -0.58
SHMT2-209ENST00000553949 Q0VFX4 171 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 FUT7Q11130 342 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 CHAF1BQ13112 559 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 KLF10Q13118 480 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 AIMP2Q13155 320 aaKnown RBP11.4□□□□□ -0.58
SHMT2-209ENST00000553949 TIGD2Q4W5G0 525 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 TRMT12Q53H54 448 aaKnown RBP11.4□□□□□ -0.58
SHMT2-209ENST00000553949 ANKRD46Q86W74 232 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 KBTBD2Q8IY47 623 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 ZNF321PQ8N8H1 164 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 ANKS4BQ8N8V4 417 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 CLEC1AQ8NC01 280 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 APCDD1LQ8NCL9 501 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 CCDC197Q8NCU1 140 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 OR7G2Q8NG99 324 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 OR7G1Q8NGA0 311 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 M1APQ8TC57 530 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 BCAS4Q8TDM0 211 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 ZNF721Q8TF20 911 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 VPS33AQ96AX1 596 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 ERP27Q96DN0 273 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 SPDL1Q96EA4 605 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 ELP4Q96EB1 424 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 VMP1Q96GC9 406 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 NUDT9Q9BW91 350 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms