RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 NXPE2Q96DL1 559 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 RBM18Q96H35 190 aaKnown RBP13.21□□□□□ -0.29
PRKCH-206ENST00000553830 CGREF1Q99674 301 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 NRSN2Q9GZP1 204 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 SLC26A1Q9H2B4 701 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 EQTNQ9NQ60 294 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 THSD1Q9NS62 852 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 SEMA3GQ9NS98 782 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 SIRT3Q9NTG7 399 aaPredicted RBP13.21□□□□□ -0.29
PRKCH-206ENST00000553830 SLC25A37Q9NYZ2 338 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 VAPAQ9P0L0 249 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 NXT1Q9UKK6 140 aaKnown RBP13.21□□□□□ -0.29
PRKCH-206ENST00000553830 ERVK-11Q9UQG0 969 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 PADI2Q9Y2J8 665 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 PCDHGA7Q9Y5G6 932 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 CLDN16Q9Y5I7 305 aa13.21□□□□□ -0.29
PRKCH-206ENST00000553830 IGKV3D-11A0A0A0MRZ8 115 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 LOC101059948A0A1B0GTJ6 334 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 C17orf105B2RV13 164 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 FXYD1O00168 92 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 ERN1O75460 977 aaKnown RBP13.2□□□□□ -0.3
PRKCH-206ENST00000553830 UQCRC2P22695 453 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 OTX2P32243 289 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 SOX11P35716 441 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 STAT5AP42229 794 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 RPS15P62841 145 aaKnown RBP13.2□□□□□ -0.3
PRKCH-206ENST00000553830 IGLV3-21P80748 117 aaPredicted RBP13.2□□□□□ -0.3
PRKCH-206ENST00000553830 LRRC74AQ0VAA2 488 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 MAP7Q14244 749 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 EXOSC7Q15024 291 aaKnown RBP13.2□□□□□ -0.3
PRKCH-206ENST00000553830 CEBPEQ15744 281 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 SFT2D3Q587I9 215 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 ZNF517Q6ZMY9 492 aaPredicted RBP13.2□□□□□ -0.3
PRKCH-206ENST00000553830 ANKRD37Q7Z713 158 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 GALNT12Q8IXK2 581 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 ST13P4Q8IZP2 240 aaPredicted RBP13.2□□□□□ -0.3
PRKCH-206ENST00000553830 PLPP5Q8NEB5 264 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 OR7G2Q8NG99 324 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 FBXO30Q8TB52 745 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 ROPN1LQ96C74 230 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 SLC7A6OSQ96CW6 309 aaPredicted RBP13.2□□□□□ -0.3
PRKCH-206ENST00000553830 NAF1Q96HR8 494 aaKnown RBP13.2□□□□□ -0.3
PRKCH-206ENST00000553830 PIF1Q9H611 641 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 WDR54Q9H977 334 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 NEUROD4Q9HD90 331 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 ADAP2Q9NPF8 381 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 ZCCHC3Q9NUD5 404 aaKnown RBP13.2□□□□□ -0.3
PRKCH-206ENST00000553830 DDX18Q9NVP1 670 aaKnown RBP13.2□□□□□ -0.3
PRKCH-206ENST00000553830 ADA2Q9NZK5 511 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 MAT2BQ9NZL9 334 aa13.2□□□□□ -0.3
PRKCH-206ENST00000553830 FARSAQ9Y285 508 aaKnown RBP13.2□□□□□ -0.3
PRKCH-206ENST00000553830 MRPS18BQ9Y676 258 aaKnown RBP13.2□□□□□ -0.3
PRKCH-206ENST00000553830 TCRBV16S1A1N1A0A5B0 115 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 ANKRD65E5RJM6 399 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 HRKO00198 91 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 ATP1B1P05026 303 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 UMODP07911 640 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 CD82P27701 267 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 PTPN4P29074 926 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 PTPN6P29350 595 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 CPOXP36551 454 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 CCT3P49368 545 aaKnown RBP13.19□□□□□ -0.3
PRKCH-206ENST00000553830 RASSF2P50749 326 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 SLC7A2P52569 658 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 RPS26P62854 115 aaKnown RBP13.19□□□□□ -0.3
PRKCH-206ENST00000553830 PRICKLE4Q2TBC4 344 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 TRMT12Q53H54 448 aaKnown RBP13.19□□□□□ -0.3
PRKCH-206ENST00000553830 LACTB2Q53H82 288 aaPredicted RBP13.19□□□□□ -0.3
PRKCH-206ENST00000553830 ZNF628Q5EBL2 1059 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 RABL3Q5HYI8 236 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 LRIF1Q5T3J3 769 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 VASH2Q86V25 355 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 PGAM4Q8N0Y7 254 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 VWA5B2Q8N398 1253 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 TRIML2Q8N7C3 387 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 AMER2Q8N7J2 671 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 SIMC1Q8NDZ2 872 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 OR2Y1Q8NGV0 311 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 NKD1Q969G9 470 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 FAM120BQ96EK7 910 aaKnown RBP13.19□□□□□ -0.3
PRKCH-206ENST00000553830 OTUB1Q96FW1 271 aaPredicted RBP13.19□□□□□ -0.3
PRKCH-206ENST00000553830 SLC35G5Q96KT7 338 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 PELOQ9BRX2 385 aaKnown RBP13.19□□□□□ -0.3
PRKCH-206ENST00000553830 YIPF4Q9BSR8 244 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 THUMPD3Q9BV44 507 aaKnown RBP13.19□□□□□ -0.3
PRKCH-206ENST00000553830 TRIM4Q9C037 500 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 B3GNT4Q9C0J1 378 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 OR8D2Q9GZM6 311 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 NDE1Q9NXR1 346 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 TAS2R1Q9NYW7 299 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 GMPR2Q9P2T1 348 aaKnown RBP13.19□□□□□ -0.3
PRKCH-206ENST00000553830 BCAP29Q9UHQ4 241 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 ERVK-19Q9WJR5 959 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 L3MBTL1Q9Y468 752 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 NEUROG3Q9Y4Z2 214 aa13.19□□□□□ -0.3
PRKCH-206ENST00000553830 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.19□□□□□ -0.3
PRKCH-206ENST00000553830 CLIC1O00299 241 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 EMC8O43402 210 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 HNRNPCL1O60812 293 aaKnown RBP13.18□□□□□ -0.3
PRKCH-206ENST00000553830 KLF7O75840 302 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms