RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 IMPDH1P20839 514 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 ENDOUP21128 410 aaKnown RBP16.79■□□□□ 0.28
SHMT2-206ENST00000553529 S1PR1P21453 382 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 CNR1P21554 472 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 NT5EP21589 574 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 PIK3R1P27986 724 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 SERPINB3P29508 390 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 PTGS2P35354 604 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 ARFIP1P53367 373 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 PRKAA2P54646 552 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 FBXW4P57775 412 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 MPEG1Q2M385 716 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 C4orf33Q8N1A6 199 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 CCNYL1Q8N7R7 359 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 ZNF615Q8N8J6 731 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 FAM13CQ8NE31 585 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 OR5L2Q8NGL0 311 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 OR5M9Q8NGP3 310 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 FAM57AQ8TBR7 257 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 MARVELD3Q96A59 401 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 SPACA9Q96E40 222 aaPredicted RBP16.79■□□□□ 0.28
SHMT2-206ENST00000553529 CNRIP1Q96F85 164 aaPredicted RBP16.79■□□□□ 0.28
SHMT2-206ENST00000553529 ZNF382Q96SR6 550 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 PNPLA3Q9NST1 481 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 SUCOQ9UBS9 1254 aaKnown RBP16.79■□□□□ 0.28
SHMT2-206ENST00000553529 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.79■□□□□ 0.28
SHMT2-206ENST00000553529 CHCHD2Q9Y6H1 151 aaPredicted RBP16.79■□□□□ 0.28
SHMT2-206ENST00000553529 V9GYY5 206 aaPredicted RBP16.79■□□□□ 0.28
SHMT2-206ENST00000553529 ZNF407Q9C0G0 2248 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 NPIPA2E9PIF3 369 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 NPIPA3F8WFD2 350 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 TAC1P20366 129 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 HTR1EP28566 365 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 MRPS35P82673 323 aaKnown RBP16.78■□□□□ 0.28
SHMT2-206ENST00000553529 LGSNQ5TDP6 509 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 SLC48A1Q6P1K1 146 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 GALNT12Q8IXK2 581 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 OR4K14Q8NGD5 310 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 METTL6Q8TCB7 284 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 CHTF18Q8WVB6 975 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 L3HYPDHQ96EM0 354 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 BRINP2Q9C0B6 783 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 ZDHHC11Q9H8X9 412 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 WDR41Q9HAD4 459 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 MID1IP1Q9NPA3 183 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 PLSCR2Q9NRY7 297 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 SACM1LQ9NTJ5 587 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 MAT2BQ9NZL9 334 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 EHD3Q9NZN3 535 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 SPRR3Q9UBC9 169 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 CNOT11Q9UKZ1 510 aaKnown RBP16.78■□□□□ 0.28
SHMT2-206ENST00000553529 SNX6Q9UNH7 406 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 CELSR2Q9HCU4 2923 aa16.78■□□□□ 0.28
SHMT2-206ENST00000553529 KDM4EB2RXH2 506 aaPredicted RBP16.77■□□□□ 0.28
SHMT2-206ENST00000553529 IL3P08700 152 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 FBXO45P0C2W1 286 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 KIR3DL1P43629 444 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 VSNL1P62760 191 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 FUT7Q11130 342 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 PRICKLE4Q2TBC4 344 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 TRMT12Q53H54 448 aaKnown RBP16.77■□□□□ 0.28
SHMT2-206ENST00000553529 OPN5Q6U736 354 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 ZYG11AQ6WRX3 759 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 SLC29A4Q7RTT9 530 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 GPALPP1Q8IXQ4 340 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 ZNF808Q8N4W9 903 aaPredicted RBP16.77■□□□□ 0.28
SHMT2-206ENST00000553529 POGLUT1Q8NBL1 392 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 ADIPOR1Q96A54 375 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 KLHL29Q96CT2 875 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 JSRP1Q96MG2 331 aaPredicted RBP16.77■□□□□ 0.28
SHMT2-206ENST00000553529 FAM173AQ9BQD7 235 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 ITPAQ9BY32 194 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 OR10A5Q9H207 317 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 ADAM29Q9UKF5 820 aa16.77■□□□□ 0.28
SHMT2-206ENST00000553529 FBN2P35556 2912 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 C2orf92A0A1B0GVN3 265 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 C2orf72A6NCS6 295 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 PLIN3O60664 434 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 CBX7O95931 251 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 P04436 131 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 PCSK2P16519 638 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 GPX3P22352 226 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 HMOX2P30519 316 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 CASP6P55212 293 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 RASA2Q15283 850 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 BNC2Q6ZN30 1099 aaPredicted RBP16.76■□□□□ 0.27
SHMT2-206ENST00000553529 CCDC71Q8IV32 467 aaPredicted RBP16.76■□□□□ 0.27
SHMT2-206ENST00000553529 SRRM1Q8IYB3 904 aaKnown RBP16.76■□□□□ 0.27
SHMT2-206ENST00000553529 GOLM1Q8NBJ4 401 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 SLC22A8Q8TCC7 542 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 ACMSDQ8TDX5 336 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 PAQR8Q8TEZ7 354 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 ZNF681Q96N22 645 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 NXF5Q9H1B4 397 aaKnown RBP16.76■□□□□ 0.27
SHMT2-206ENST00000553529 SLC6A15Q9H2J7 730 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 BRF2Q9HAW0 419 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 VPS29Q9UBQ0 182 aa16.76■□□□□ 0.27
SHMT2-206ENST00000553529 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.76■□□□□ 0.27
SHMT2-206ENST00000553529 PCNX1Q96RV3 2341 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 C17orf51A8MQB3 221 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms