RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 MORN4Q8NDC4 146 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 OR1N1Q8NGS0 311 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 OR9A2Q8NGT5 310 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 M1APQ8TC57 530 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 SLC2A12Q8TD20 617 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 DOK4Q8TEW6 326 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 TTC9Q92623 222 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 RBM18Q96H35 190 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 FBXL20Q96IG2 436 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 FER1L6-AS2Q96M78 137 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 DGAT2Q96PD7 388 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 NPAS2Q99743 824 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 NUDT9Q9BW91 350 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 DPY30Q9C005 99 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 BHLHE41Q9C0J9 482 aaPredicted RBP13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 ING2Q9H160 280 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 MMP25Q9NPA2 562 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 ACSS1Q9NUB1 689 aaPredicted RBP13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 G3BP2Q9UN86 482 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 ZNF780BQ9Y6R6 833 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 ATRXP46100 2492 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 TMEM200CA6NKL6 621 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 PDPK1O15530 556 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 PRKNO60260 465 aaPredicted RBP13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 PSMG1O95456 288 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 CBX7O95931 251 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 IFNA16P05015 189 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 ITGB2P05107 769 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 IFI6P09912 130 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 ITGAMP11215 1152 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 COX7A2P14406 83 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 SOX11P35716 441 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 RPL3P39023 403 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 CLNS1AP54105 237 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 AIMP2Q13155 320 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 MLC1Q15049 377 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 EXT1Q16394 746 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 COL28A1Q2UY09 1125 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 LINC00303Q3SY05 128 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 CPTPQ5TA50 214 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 H3F3CQ6NXT2 135 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 C19orf48Q6RUI8 117 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 FAM111BQ6SJ93 734 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 ZNF551Q7Z340 670 aaPredicted RBP13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 SPATA21Q7Z572 469 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 CPSF7Q8N684 471 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 ADCY4Q8NFM4 1077 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 PSMA8Q8TAA3 256 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 DAZLQ92904 295 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 RIT1Q92963 219 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 NCLNQ969V3 563 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 SENP5Q96HI0 755 aaPredicted RBP13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 EPN3Q9H201 632 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 SIRT3Q9NTG7 399 aaPredicted RBP13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 SH3BP4Q9P0V3 963 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 MAPRE3Q9UPY8 281 aa13.82□□□□□ -0.2
MTHFD1-204ENST00000553405 CPAMD8Q8IZJ3 1885 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 ASPDHA6ND91 283 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 PLOD2O00469 737 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 OR10H2O60403 315 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 PLOD3O60568 738 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 SLC22A3O75751 556 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 EFNA1P20827 205 aaPredicted RBP13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 DGKQP52824 942 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 SLC37A1P57057 533 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 IRX1P78414 480 aaPredicted RBP13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 MRPS35P82673 323 aaKnown RBP13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 RCAN2Q14206 197 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 DPY19L1Q2PZI1 675 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 OR4F3Q6IEY1 312 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 PCSK4Q6UW60 755 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 GALNT12Q8IXK2 581 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 KBTBD2Q8IY47 623 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 MIER2Q8N344 545 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 GALNT16Q8N428 558 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 GLB1L3Q8NCI6 653 aaPredicted RBP13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 OR7G2Q8NG99 324 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 VPS50Q96JG6 964 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 BBS4Q96RK4 519 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 ELAC2Q9BQ52 826 aaKnown RBP13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 DUSP26Q9BV47 211 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 ATP13A2Q9NQ11 1180 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 SERHLQ9NQF3 203 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 SAR1AQ9NR31 198 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 TMEM45AQ9NWC5 275 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 NTMQ9P121 344 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 ERVK-19Q9WJR5 959 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 ENTPD4Q9Y227 616 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 CLCA3PQ9Y6N3 262 aa13.81□□□□□ -0.2
MTHFD1-204ENST00000553405 CACNA1BQ00975 2339 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 NUP214P35658 2090 aaPredicted RBP13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 MAN1A2O60476 641 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 NT5EP21589 574 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 SSTR4P31391 388 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 MPIP34949 423 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 KIR3DL1P43629 444 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 CDK9P50750 372 aaKnown RBP13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 NCBP2P52298 156 aaKnown RBP eCLIP13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 RRADP55042 308 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 SRSF11Q05519 484 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms