RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ENTPD4Q9Y227 616 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 PCDHGA10Q9Y5H3 936 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 ZNF780BQ9Y6R6 833 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 NUP214P35658 2090 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 ATP6AP2A0A1C7CYW4 349 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 HRKO00198 91 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 PRKNO60260 465 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 MAN1A2O60476 641 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 ATP6AP2O75787 350 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 CLPSP04118 112 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 JUNP05412 331 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 BCKDHAP12694 445 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 TACR1P25103 407 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 FEN1P39748 380 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 ASMTP46597 345 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 HK2P52789 917 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 SLC37A1P57057 533 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 PPP2R2AP63151 447 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 RNF4P78317 190 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 OCRLQ01968 901 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 C2orf80Q0P641 193 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 FUT7Q11130 342 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 MAD2L1Q13257 205 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 TUBA3CQ13748 450 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 ZNF267Q14586 743 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 ZNF750Q32MQ0 723 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 RFTN2Q52LD8 501 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 C6orf136Q5SQH8 315 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 TUBA3EQ6PEY2 450 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 RNF111Q6ZNA4 994 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 C9orf40Q8IXQ3 194 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 LRRC34Q8IZ02 419 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 MDS2Q8NDY4 140 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 OR7G1Q8NGA0 311 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 NUBPLQ8TB37 319 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 ZNF675Q8TD23 568 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 EXOSC8Q96B26 276 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 TUBGCP3Q96CW5 907 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 ERP27Q96DN0 273 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 UTP23Q9BRU9 249 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 CDCP1Q9H5V8 836 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 MANSC1Q9H8J5 431 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 TRIM45Q9H8W5 580 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 MEAF6Q9HAF1 191 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 SLAMF7Q9NQ25 335 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 SLC35C2Q9NQQ7 365 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 ASIC5Q9NY37 505 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 TAS2R7Q9NYW3 318 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 MAT2BQ9NZL9 334 aa10.88□□□□□ -0.67
TRAFD1-209ENST00000552896 ZGRF1Q86YA3 2104 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 TENM4Q6N022 2769 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 TMEM200CA6NKL6 621 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 TBX19O60806 448 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 PRAMEF2O60811 474 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 PEX11AO75192 247 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 VPS4BO75351 444 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 ITGA10O75578 1167 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 SLITRK5O94991 958 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 CT62P0C5K7 136 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 NT5EP21589 574 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 NTSP30990 170 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 HPCAL1P37235 193 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 HLCSP50747 726 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 SSR4P51571 173 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 TLE1Q04724 770 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 DUSP2Q05923 314 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 MAP4K2Q12851 820 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 PDE7AQ13946 482 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 EBPQ15125 230 aaKnown RBP10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 PRICKLE4Q2TBC4 344 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 PLEKHN1Q494U1 663 aaPredicted RBP10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 COLEC12Q5KU26 742 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 RPUSD3Q6P087 351 aaKnown RBP10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 SLC29A4Q7RTT9 530 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 ZNF605Q86T29 641 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 TICAM1Q8IUC6 712 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 GPALPP1Q8IXQ4 340 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 FAM9CQ8IZT9 166 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 HORMAD2Q8N7B1 307 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 FNDC5Q8NAU1 212 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 OR5L2Q8NGL0 311 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 SUN3Q8TAQ9 357 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 THAP3Q8WTV1 239 aaPredicted RBP10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 CTHRC1Q96CG8 243 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 MTERF3Q96E29 417 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 EGLN2Q96KS0 407 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 TSSK3Q96PN8 268 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 WWTR1Q9GZV5 400 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 PLA2G3Q9NZ20 509 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 NOP53Q9NZM5 478 aaKnown RBP10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 LUZP4Q9P127 313 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 MYOTQ9UBF9 498 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 GIMAP2Q9UG22 337 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 EXO1Q9UQ84 846 aaKnown RBP10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 YARS2Q9Y2Z4 477 aaKnown RBP10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 PCDHGB6Q9Y5F9 930 aa10.87□□□□□ -0.67
TRAFD1-209ENST00000552896 TRPC5OSA6NMA1 111 aa10.86□□□□□ -0.67
TRAFD1-209ENST00000552896 MYO1GB0I1T2 1018 aa10.86□□□□□ -0.67
TRAFD1-209ENST00000552896 SLCO1B7G3V0H7 640 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms