RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 UBQLN3Q9H347 655 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 ACSS3Q9H6R3 686 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 UBTD1Q9HAC8 227 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 ROPN1Q9HAT0 212 aaPredicted RBP10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 SMYD2Q9NRG4 433 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 CNIH4Q9P003 139 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 NDRG3Q9UGV2 375 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 CNOT11Q9UKZ1 510 aaKnown RBP10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 SOX13Q9UN79 622 aa10.39□□□□□ -0.75
SUPT16H-202ENST00000552829 A8MXE2 369 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 TLX2O43763 284 aaPredicted RBP10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 CTNSO60931 367 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 ERN1O75460 977 aaKnown RBP10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 ETHE1O95571 254 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 HPNP05981 417 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 C8GP07360 202 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 F7P08709 466 aaPredicted RBP10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 GSTA2P09210 222 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 CRYGSP22914 178 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 HPDP32754 393 aaPredicted RBP10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 SOX18P35713 384 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 MSH2P43246 934 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 CDK9P50750 372 aaKnown RBP10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 MMP16P51512 607 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 MAGOHP61326 146 aaKnown RBP10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 BTN3A2P78410 334 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 ASPHQ12797 758 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 SLC13A2Q13183 592 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 SP140Q13342 867 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 PHKG1Q16816 387 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 TOR1AIP1Q5JTV8 583 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 DCST1Q5T197 706 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 PRAMEF20Q5VT98 475 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 UGT3A1Q6NUS8 523 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 ADGRE4PQ86SQ3 457 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 MEIOBQ8N635 442 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 SLC15A4Q8N697 577 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 NUBPLQ8TB37 319 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 ZPLD1Q8TCW7 415 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 SLC2A12Q8TD20 617 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 ZNF721Q8TF20 911 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 NEIL2Q969S2 332 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 ALKBH8Q96BT7 664 aaKnown RBP10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 PYCR2Q96C36 320 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 SPACA9Q96E40 222 aaPredicted RBP10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 ZFP3Q96NJ6 502 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 WFIKKN1Q96NZ8 548 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 TRIB1Q96RU8 372 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 SFXN3Q9BWM7 321 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 ALOXE3Q9BYJ1 711 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 OR8D2Q9GZM6 311 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 PPANQ9NQ55 473 aaKnown RBP10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 PSMC3IPQ9P2W1 217 aaPredicted RBP10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 CAMK2AQ9UQM7 478 aa10.38□□□□□ -0.75
SUPT16H-202ENST00000552829 EXPH5Q8NEV8 1989 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 A0A087X1B8 175 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 MYOCOSA0A1B0GUC4 107 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 ANKRD33BA6NCL7 494 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 HMGB1P1B2RPK0 211 aaPredicted RBP10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 AP3B1O00203 1094 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 RCBTB2O95199 551 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 IGKV3-11P04433 115 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 IFNA16P05015 189 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 GDF1P27539 372 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 SERPINB4P48594 390 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 CSHL1Q14406 222 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 KRTAP24-1Q3LI83 254 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 FNDC7Q5VTL7 733 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 ARMC3Q5W041 872 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 DNAJC14Q6Y2X3 702 aaPredicted RBP10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 CLNKQ7Z7G1 428 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 CROCCP2Q86T23 111 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 LUZP2Q86TE4 346 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 RIBC1Q8N443 379 aaPredicted RBP10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 FAM76AQ8TAV0 307 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 DCAKDQ8WVC6 231 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 EEF1AKMT1Q8WVE0 214 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 SLC44A1Q8WWI5 657 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 SLC5A11Q8WWX8 675 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 GAL3ST3Q96A11 431 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 TLCD1Q96CP7 247 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 CERS2Q96G23 380 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 CSF3RQ99062 836 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 UGT2B28Q9BY64 529 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 PELI2Q9HAT8 420 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 LGALS13Q9UHV8 139 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 MRPS33Q9Y291 106 aaKnown RBP10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 SLC6A5Q9Y345 797 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 COMMD10Q9Y6G5 202 aa10.37□□□□□ -0.75
SUPT16H-202ENST00000552829 A0A0G2JN53 185 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 FAM159BA6NKW6 160 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 CD5LO43866 347 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 CDH16O75309 829 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 TBX6O95947 436 aaPredicted RBP10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 INHBAP08476 426 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 HNRNPH1P31943 449 aaKnown RBP10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 MGAT5Q09328 741 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 ZNF470Q6ECI4 717 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 LRRC8EQ6NSJ5 796 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms