RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 CROCCP2Q86T23 111 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 TRABD2AQ86V40 505 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 MYLK4Q86YV6 388 aaPredicted RBP10.93□□□□□ -0.66
CKAP4-202ENST00000552828 TGIF2LYQ8IUE0 185 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 SLC22A9Q8IVM8 553 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 C4orf33Q8N1A6 199 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 NUBPLQ8TB37 319 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 SLC2A12Q8TD20 617 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 ZNF721Q8TF20 911 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 SARAFQ96BY9 339 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 KCNC2Q96PR1 638 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 F2RL3Q96RI0 385 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 TBCDQ9BTW9 1192 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 C1QTNF3Q9BXJ4 246 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 ROGDIQ9GZN7 287 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 IQCGQ9H095 443 aaKnown RBP10.93□□□□□ -0.66
CKAP4-202ENST00000552828 NOL11Q9H8H0 719 aaKnown RBP10.93□□□□□ -0.66
CKAP4-202ENST00000552828 PRM3Q9NNZ6 103 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 SEMA4BQ9NPR2 832 aaPredicted RBP10.93□□□□□ -0.66
CKAP4-202ENST00000552828 DNAJB12Q9NXW2 375 aaKnown RBP10.93□□□□□ -0.66
CKAP4-202ENST00000552828 TUBA8Q9NY65 449 aaPredicted RBP10.93□□□□□ -0.66
CKAP4-202ENST00000552828 PCTPQ9UKL6 214 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 ATG4BQ9Y4P1 393 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 PHF3Q92576 2039 aaKnown RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ABCA2Q9BZC7 2435 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ATP6AP2A0A1C7CYW4 349 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 SYT5O00445 386 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 RGS16O15492 202 aaPredicted RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ATP6AP2O75787 350 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 CLDN9O95484 217 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ETHE1O95571 254 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 IGKV3-11P04433 115 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 P04436 131 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 RPS17P08708 135 aaKnown RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 CCL3P10147 92 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 MYL2P10916 166 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 GABRA1P14867 456 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 CD22P20273 847 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 IMPDH1P20839 514 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ENDOUP21128 410 aaKnown RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ATP5A1P25705 553 aaKnown RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 SERPINB1P30740 379 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ARL1P40616 181 aaPredicted RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 PEX19P40855 299 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 DNASE1L1P49184 302 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 MAN2A2P49641 1150 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 CCNG1P51959 295 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 PRKAA2P54646 552 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 HERVK_113P63132 956 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 IGLV3-21P80748 117 aaPredicted RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 TBL3Q12788 808 aaKnown RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 CEP85LQ5SZL2 805 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 C1orf185Q5T7R7 199 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 WLSQ5T9L3 541 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 RIPPLY2Q5TAB7 128 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 GRHL2Q6ISB3 625 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ZNF793Q6ZN11 406 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 LAS2Q8IYD9 372 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ACOT4Q8N9L9 421 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 CCDC63Q8NA47 563 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 CHDHQ8NE62 594 aaPredicted RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 SRFBP1Q8NEF9 429 aaKnown RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ANKRD9Q96BM1 317 aaPredicted RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 REPS1Q96D71 796 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 CCDC126Q96EE4 140 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ERVK-6Q9BXR3 956 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 COPS7BQ9H9Q2 264 aaPredicted RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 RYDENQ9NUL5 291 aaKnown RBP10.92□□□□□ -0.66
CKAP4-202ENST00000552828 B4GALT7Q9UBV7 327 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ADGRE2Q9UHX3 823 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 ACAD8Q9UKU7 415 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 EMCNQ9ULC0 261 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 DNAJC13O75165 2243 aa10.92□□□□□ -0.66
CKAP4-202ENST00000552828 NAV3Q8IVL0 2385 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 TRGV5A0A0B4J1U4 118 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 MYOCOSA0A1B0GUC4 107 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 OR7A17O14581 309 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 PLIN3O60664 434 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 DIAPH2O60879 1101 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 LDB3O75112 727 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 SUPT7LO94864 414 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 NADKO95544 446 aaPredicted RBP10.91□□□□□ -0.66
CKAP4-202ENST00000552828 PROCP04070 461 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 PCNAP12004 261 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 HOXB4P17483 251 aaPredicted RBP10.91□□□□□ -0.66
CKAP4-202ENST00000552828 TNNI3P19429 210 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 STT3AP46977 705 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 BIKQ13323 160 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 TMEM35AQ53FP2 167 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 ZNF678Q5SXM1 525 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 BEND6Q5SZJ8 279 aaPredicted RBP10.91□□□□□ -0.66
CKAP4-202ENST00000552828 SLC22A10Q63ZE4 541 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 LYPD8Q6UX82 237 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 LRIG3Q6UXM1 1119 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 ZYG11AQ6WRX3 759 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 MILR1Q7Z6M3 343 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 SLC15A4Q8N697 577 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 BANPQ8N9N5 519 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 L3MBTL4Q8NA19 623 aa10.91□□□□□ -0.66
CKAP4-202ENST00000552828 OR7G3Q8NG95 312 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms