RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 MED27Q6P2C8 311 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 GPR180Q86V85 440 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 PACS2Q86VP3 889 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 ANKMY2Q8IV38 441 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 LAS2Q8IYD9 372 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 C9orf106Q8NAJ2 232 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 PDPRQ8NCN5 879 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 ACTRT1Q8TDG2 376 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 SMPDL3BQ92485 455 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 RIT1Q92963 219 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 UBE2E3Q969T4 207 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 CMTM7Q96FZ5 175 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 WDYHV1Q96HA8 205 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 DACH2Q96NX9 599 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 GNRHR2Q96P88 292 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 RBM24Q9BX46 236 aaKnown RBP14.92□□□□□ -0.02
RAB5C-209ENST00000552162 DDX47Q9H0S4 455 aaKnown RBP14.92□□□□□ -0.02
RAB5C-209ENST00000552162 OR51B5Q9H339 312 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 CALHM2Q9HA72 323 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 TEX10Q9NXF1 929 aaPredicted RBP14.92□□□□□ -0.02
RAB5C-209ENST00000552162 GALNT8Q9NY28 637 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 CD274Q9NZQ7 290 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 CSPG4Q6UVK1 2322 aa14.92□□□□□ -0.02
RAB5C-209ENST00000552162 SH3D21A4FU49 640 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 CD1DP15813 335 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 PCSK6P29122 969 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 SERPINB1P30740 379 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 TLX1P31314 330 aaPredicted RBP14.91□□□□□ -0.02
RAB5C-209ENST00000552162 BUD31P41223 144 aaPredicted RBP14.91□□□□□ -0.02
RAB5C-209ENST00000552162 CPA2P48052 419 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 RAP1GDS1P52306 607 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 HNRNPH2P55795 449 aaKnown RBP14.91□□□□□ -0.02
RAB5C-209ENST00000552162 RCAN2Q14206 197 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 E2F2Q14209 437 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 EIPR1Q53HC9 387 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 WIPI1Q5MNZ9 446 aaPredicted RBP14.91□□□□□ -0.02
RAB5C-209ENST00000552162 LRRC70Q7Z2Q7 622 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 LUZP2Q86TE4 346 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 P3H2Q8IVL5 708 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 ZNF441Q8N8Z8 693 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 OR7G3Q8NG95 312 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 SPPL2AQ8TCT8 520 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 ZNF592Q92610 1267 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 EXT2Q93063 718 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 ABTB1Q969K4 478 aaPredicted RBP14.91□□□□□ -0.02
RAB5C-209ENST00000552162 OSBPL9Q96SU4 736 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 MCMBPQ9BTE3 642 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 ANGPTL4Q9BY76 406 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 CAB39LQ9H9S4 337 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 SNX15Q9NRS6 342 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 MOCS1Q9NZB8 636 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 PTBP2Q9UKA9 531 aaKnown RBP14.91□□□□□ -0.02
RAB5C-209ENST00000552162 PPP2R2CQ9Y2T4 447 aa14.91□□□□□ -0.02
RAB5C-209ENST00000552162 ARID1AO14497 2285 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 MED12Q93074 2177 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 C2orf92A0A1B0GVN3 265 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 H7C1Q1 480 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 PLPP1O14494 284 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 PHGDHO43175 533 aaKnown RBP14.9□□□□□ -0.02
RAB5C-209ENST00000552162 GPR75O95800 540 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 S100BP04271 92 aaPredicted RBP14.9□□□□□ -0.02
RAB5C-209ENST00000552162 CCDC166P0CW27 439 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 SSTR4P31391 388 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 SOX18P35713 384 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 SLCO1A2P46721 670 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 TMED10P49755 219 aaKnown RBP14.9□□□□□ -0.02
RAB5C-209ENST00000552162 POU4F1Q01851 419 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 FOXF2Q12947 444 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 DDX39BQ13838 428 aaKnown RBP14.9□□□□□ -0.02
RAB5C-209ENST00000552162 DEPDC1Q5TB30 811 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 CIARTQ8N365 385 aaPredicted RBP14.9□□□□□ -0.02
RAB5C-209ENST00000552162 ZCCHC7Q8N3Z6 543 aaKnown RBP14.9□□□□□ -0.02
RAB5C-209ENST00000552162 RNF175Q8N4F7 328 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 ISL2Q96A47 359 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 RGMAQ96B86 450 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 SECISBP2Q96T21 854 aaKnown RBP14.9□□□□□ -0.02
RAB5C-209ENST00000552162 SFXN3Q9BWM7 321 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 CD244Q9BZW8 370 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 NSMCE4AQ9NXX6 385 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 NPFFR2Q9Y5X5 522 aa14.9□□□□□ -0.02
RAB5C-209ENST00000552162 GLOD5A6NK44 160 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 GNB5O14775 395 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 SMPD2O60906 423 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 CYP4B1P13584 511 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 CASP3P42574 277 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 NAGLUP54802 743 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 ARL4CP56559 192 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 ATP6V0D1P61421 351 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 FASTKD3Q14CZ7 662 aaKnown RBP14.89□□□□□ -0.03
RAB5C-209ENST00000552162 HLA-DQA1Q5Y7H0 255 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 LRRC75A-AS1Q8N1F1 130 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 FBXO36Q8NEA4 188 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 FAM83FQ8NEG4 500 aaPredicted RBP14.89□□□□□ -0.03
RAB5C-209ENST00000552162 ZPLD1Q8TCW7 415 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 TP53INP1Q96A56 240 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 TSPAN17Q96FV3 270 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 TMEM41AQ96HV5 264 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 CENPKQ9BS16 269 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 RNF112Q9ULX5 631 aa14.89□□□□□ -0.03
RAB5C-209ENST00000552162 EIF3LQ9Y262 564 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms