RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 BCKDHAP12694 445 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 PLA2G2AP14555 144 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 SDC1P18827 310 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 DDCP20711 480 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 GSTM5P46439 218 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 OR1C1Q15619 314 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 INPP5JQ15735 1006 aaPredicted RBP12.76□□□□□ -0.37
TROAP-213ENST00000550709 IGFBP7Q16270 282 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 PRSS53Q2L4Q9 553 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 SPINK14Q6IE38 97 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 ANKRD26P1Q6NSI1 321 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 RNF111Q6ZNA4 994 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 TRIM42Q8IWZ5 723 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 HOMEZQ8IX15 550 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 C9orf40Q8IXQ3 194 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 LGI4Q8N135 537 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 TMEM156Q8N614 296 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 FNDC5Q8NAU1 212 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 SUN3Q8TAQ9 357 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.76□□□□□ -0.37
TROAP-213ENST00000550709 METTL2AQ96IZ6 378 aaKnown RBP12.76□□□□□ -0.37
TROAP-213ENST00000550709 ART5Q96L15 291 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 ZNF681Q96N22 645 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 SIGLEC12Q96PQ1 595 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 BBS4Q96RK4 519 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 CCT7Q99832 543 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 NUF2Q9BZD4 464 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 RNF32Q9H0A6 362 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 SLC35C2Q9NQQ7 365 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 KLHL1Q9NR64 748 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 THAP1Q9NVV9 213 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 MYOTQ9UBF9 498 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 MARCOQ9UEW3 520 aaPredicted RBP12.76□□□□□ -0.37
TROAP-213ENST00000550709 EXO1Q9UQ84 846 aaKnown RBP12.76□□□□□ -0.37
TROAP-213ENST00000550709 ENTPD4Q9Y227 616 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 PCDHGA10Q9Y5H3 936 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 SNNO75324 88 aaPredicted RBP12.75□□□□□ -0.37
TROAP-213ENST00000550709 SNUPNO95149 360 aaKnown RBP12.75□□□□□ -0.37
TROAP-213ENST00000550709 PCSK2P16519 638 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 GALNSP34059 522 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 CYB561P49447 251 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 SSR4P51571 173 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 HK2P52789 917 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 SLC37A1P57057 533 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 SPRED3Q2MJR0 410 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 C6orf136Q5SQH8 315 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 NUP210LQ5VU65 1888 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 IL23RQ5VWK5 629 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 SLC29A4Q7RTT9 530 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 VWA5B2Q8N398 1253 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 LIX1Q8N485 282 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 OR5L2Q8NGL0 311 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 OR9A2Q8NGT5 310 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 CPT1CQ8TCG5 803 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 ZNF75CPQ92670 426 aaPredicted RBP12.75□□□□□ -0.37
TROAP-213ENST00000550709 KAT2AQ92830 837 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 FCRL1Q96LA6 429 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 HES7Q9BYE0 225 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 AKTIPQ9H8T0 292 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.75□□□□□ -0.37
TROAP-213ENST00000550709 EHD3Q9NZN3 535 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 LRFN1Q9P244 771 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 BCAP29Q9UHQ4 241 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 WBP11Q9Y2W2 641 aaKnown RBP12.75□□□□□ -0.37
TROAP-213ENST00000550709 YARS2Q9Y2Z4 477 aaKnown RBP12.75□□□□□ -0.37
TROAP-213ENST00000550709 TMED5Q9Y3A6 229 aa12.75□□□□□ -0.37
TROAP-213ENST00000550709 DOCK10Q96BY6 2186 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 PRAMEF2O60811 474 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 CLPSP04118 112 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 ATP1B1P05026 303 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 MAPK1P28482 360 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 HLCSP50747 726 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 NCBP2P52298 156 aaKnown RBP eCLIP12.74□□□□□ -0.37
TROAP-213ENST00000550709 MRPS35P82673 323 aaKnown RBP12.74□□□□□ -0.37
TROAP-213ENST00000550709 SRSF11Q05519 484 aaKnown RBP12.74□□□□□ -0.37
TROAP-213ENST00000550709 MGAT2Q10469 447 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 FUT7Q11130 342 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 EXOSC7Q15024 291 aaKnown RBP12.74□□□□□ -0.37
TROAP-213ENST00000550709 PRICKLE4Q2TBC4 344 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 TRMT12Q53H54 448 aaKnown RBP12.74□□□□□ -0.37
TROAP-213ENST00000550709 ZNF766Q5HY98 468 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 IL20RBQ6UXL0 311 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 IKBIPQ70UQ0 350 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 SAMD14Q8IZD0 417 aaPredicted RBP12.74□□□□□ -0.37
TROAP-213ENST00000550709 HORMAD2Q8N7B1 307 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 SIMC1Q8NDZ2 872 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 OR8K3Q8NH51 312 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 RAB3IL1Q8TBN0 382 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 DYDC1Q8WWB3 177 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 ASB15Q8WXK1 588 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 PPCDCQ96CD2 204 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 SNRNP40Q96DI7 357 aaKnown RBP12.74□□□□□ -0.37
TROAP-213ENST00000550709 C5orf34Q96MH7 638 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 RASL10BQ96S79 203 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 OR10A5Q9H207 317 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 ACBD3Q9H3P7 528 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 ANKRA2Q9H9E1 313 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 MAT2BQ9NZL9 334 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 SH3BP4Q9P0V3 963 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 HAO1Q9UJM8 370 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms