RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 CHCHD4Q8N4Q1 142 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF614Q8N883 585 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF248Q8NDW4 579 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 NUP37Q8NFH4 326 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF519Q8TB69 540 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 RAET1EQ8TD07 263 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 UBTD2Q8WUN7 234 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 PRCCQ92733 491 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-205ENST00000550592 SLCO4A1Q96BD0 722 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 ART5Q96L15 291 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF560Q96MR9 790 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 MARCH7Q9H992 704 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 C3orf14Q9HBI5 128 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 KCNMB3Q9NPA1 279 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 SPHK2Q9NRA0 654 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 ANO10Q9NW15 660 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 UBQLN2Q9UHD9 624 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 TEKT2Q9UIF3 430 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 EXOC7Q9UPT5 735 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 EXOGQ9Y2C4 368 aaKnown RBP4.14□□□□□ -1.75
LIMA1-205ENST00000550592 SH3GLB1Q9Y371 365 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 TPRP12270 2363 aaKnown RBP4.14□□□□□ -1.75
LIMA1-205ENST00000550592 TCF20Q9UGU0 1960 aaKnown RBP4.14□□□□□ -1.75
LIMA1-205ENST00000550592 PRUNE2Q8WUY3 3088 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 CNTNAP2Q9UHC6 1331 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF646O15015 1829 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-205ENST00000550592 EDC4Q6P2E9 1401 aaKnown RBP4.13□□□□□ -1.75
LIMA1-205ENST00000550592 SNED1Q8TER0 1413 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 LOC105371242A0A075B767 164 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 TRBV2A0A0J9YWF9 115 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 IQCMA0A1B0GVH7 501 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 CCSO14618 274 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 ZG16O60844 167 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 MTRF1O75570 445 aaKnown RBP4.13□□□□□ -1.75
LIMA1-205ENST00000550592 ANGPTL1O95841 491 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 ZSCAN5DPP0CG00 497 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 B4GALT1P15291 398 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 UGT1A6P19224 532 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 ATP12AP54707 1039 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 BACE1P56817 501 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 GSCP56915 257 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-205ENST00000550592 EVCP57679 992 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 STARD6P59095 220 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 PMP22Q01453 160 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 DHODHQ02127 395 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 GFPT1Q06210 699 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-205ENST00000550592 MSLNQ13421 630 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-205ENST00000550592 BSPRYQ5W0U4 402 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 ADAM5Q6NVV9 412 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 CACUL1Q86Y37 369 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 WDSUB1Q8N9V3 476 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 RPLP0P6Q8NHW5 317 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 CNRIP1Q96F85 164 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-205ENST00000550592 NSMCE3Q96MG7 304 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 ERGIC2Q96RQ1 377 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 S1PR3Q99500 378 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 S100A14Q9HCY8 104 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 B3GAT2Q9NPZ5 323 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 ZDHHC18Q9NUE0 388 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 PLEK2Q9NYT0 353 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 MDFICQ9P1T7 246 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 KLK11Q9UBX7 282 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 FETUBQ9UGM5 382 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 TSPAN16Q9UKR8 245 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 MRPS18CQ9Y3D5 142 aaKnown RBP4.13□□□□□ -1.75
LIMA1-205ENST00000550592 KIF24Q5T7B8 1368 aa4.13□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF318Q5VUA4 2279 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 SYCE3A1L190 88 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 ANHXE9PGG2 379 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 K7EQD1 137 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 TLR4O00206 839 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 TNFSF12O43508 249 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 SOCS5O75159 536 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 NXPH4O95158 308 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 RPLP0P05388 317 aaKnown RBP4.12□□□□□ -1.75
LIMA1-205ENST00000550592 CT45A8P0DMV1 189 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 CT45A9P0DMV2 189 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 STIP1P31948 543 aaKnown RBP4.12□□□□□ -1.75
LIMA1-205ENST00000550592 CNN1P51911 297 aaKnown RBP4.12□□□□□ -1.75
LIMA1-205ENST00000550592 CASP9P55211 416 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 ERVK-16P61578 105 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 MEF2DQ14814 521 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 CT45A2Q5DJT8 189 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 RAB12Q6IQ22 244 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 CAPN13Q6MZZ7 669 aaPredicted RBP4.12□□□□□ -1.75
LIMA1-205ENST00000550592 OR9Q2Q8NGE9 314 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 OR10G7Q8NGN6 311 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 URGCPQ8TCY9 931 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 GPR148Q8TDV2 347 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 DTD2Q96FN9 168 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF274Q96GC6 653 aaPredicted RBP4.12□□□□□ -1.75
LIMA1-205ENST00000550592 SPXQ9BT56 116 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 TEX13AQ9BXU3 409 aaPredicted RBP4.12□□□□□ -1.75
LIMA1-205ENST00000550592 PIGVQ9NUD9 493 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 ASIC3Q9UHC3 531 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 OR1A2Q9Y585 309 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 ZHX2Q9Y6X8 837 aa4.12□□□□□ -1.75
LIMA1-205ENST00000550592 SPTBN4Q9H254 2564 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 COL2A1P02458 1487 aaPredicted RBP4.11□□□□□ -1.75
LIMA1-205ENST00000550592 UNC79Q9P2D8 2635 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms