RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 FOXJ1Q92949 421 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 SCRN2Q96FV2 425 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 ZSWIM3Q96MP5 696 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 ATF6BQ99941 703 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 DPAGT1Q9H3H5 408 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 METTL17Q9H7H0 456 aaPredicted RBP11.51□□□□□ -0.57
VDR-208ENST00000550325 SLC25A19Q9HC21 320 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 IL26Q9NPH9 171 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 IMP3Q9NV31 184 aaKnown RBP11.51□□□□□ -0.57
VDR-208ENST00000550325 TRPM5Q9NZQ8 1165 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 CD84Q9UIB8 345 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 E7EQ34 232 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 DVL2O14641 736 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 ETHE1O95571 254 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 RHCEP18577 417 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 PCBP1Q15365 356 aaKnown RBP eCLIP11.51□□□□□ -0.57
VDR-208ENST00000550325 CRB2Q5IJ48 1285 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 KIAA0907Q7Z7F0 614 aaPredicted RBP11.51□□□□□ -0.57
VDR-208ENST00000550325 KIAA1143Q96AT1 154 aaPredicted RBP11.51□□□□□ -0.57
VDR-208ENST00000550325 SENP5Q96HI0 755 aaPredicted RBP11.51□□□□□ -0.57
VDR-208ENST00000550325 GSX2Q9BZM3 304 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 SDHAF2Q9NX18 166 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 SCML2Q9UQR0 700 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 NOD1Q9Y239 953 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 CACNG2Q9Y698 323 aa11.51□□□□□ -0.57
VDR-208ENST00000550325 AOAHP28039 575 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 LCN1P31025 176 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 CLCNKAP51800 687 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 LIM2P55344 173 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 MAZP56270 477 aaKnown RBP11.5□□□□□ -0.57
VDR-208ENST00000550325 KIAA1024LP59773 190 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 ZNF385BQ569K4 471 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 GPRC6AQ5T6X5 926 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 LYPD4Q6UWN0 246 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 ALKAL2Q6UX46 152 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 OR8J2Q8NGG1 315 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 OR8K5Q8NH50 307 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 PPCDCQ96CD2 204 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 MYO19Q96H55 970 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 NARS2Q96I59 477 aaKnown RBP11.5□□□□□ -0.57
VDR-208ENST00000550325 ERMAPQ96PL5 475 aaPredicted RBP11.5□□□□□ -0.57
VDR-208ENST00000550325 RBP7Q96R05 134 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 P2RY13Q9BPV8 354 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 CACNG6Q9BXT2 260 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 GKN1Q9NS71 199 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 KCTD5Q9NXV2 234 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 IL20RAQ9UHF4 553 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 HRH3Q9Y5N1 445 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 A0A0G2JLL6 359 aaPredicted RBP11.5□□□□□ -0.57
VDR-208ENST00000550325 ALDOBP05062 364 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 H1F0P07305 194 aaKnown RBP11.5□□□□□ -0.57
VDR-208ENST00000550325 PIPP12273 146 aaPredicted RBP11.5□□□□□ -0.57
VDR-208ENST00000550325 CPEP16870 476 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 TPMTP51580 245 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 SGSHP51688 502 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 LSM11P83369 360 aaKnown RBP eCLIP11.5□□□□□ -0.57
VDR-208ENST00000550325 DEFA5Q01523 94 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 OLIG3Q7RTU3 272 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 PRRT2Q7Z6L0 340 aaPredicted RBP11.5□□□□□ -0.57
VDR-208ENST00000550325 VRK3Q8IV63 474 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 ADGRF3Q8IZF5 1079 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 TOMM5Q8N4H5 51 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 HMGB4Q8WW32 186 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 ASZ1Q8WWH4 475 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 MS4A3Q96HJ5 214 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 HTATIP2Q9BUP3 242 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 TTYH1Q9H313 450 aaPredicted RBP11.5□□□□□ -0.57
VDR-208ENST00000550325 RETREG1Q9H6L5 497 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 IFT46Q9NQC8 304 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 IGLV3-10A0A075B6K4 115 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 TGFB1P01137 390 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 MT-ND4P03905 459 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 RRASP10301 218 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 HMGCLP35914 325 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 ERVK-21P61565 698 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 GRIN2CQ14957 1233 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 ZXDCQ2QGD7 858 aaPredicted RBP11.5□□□□□ -0.57
VDR-208ENST00000550325 GPR135Q8IZ08 494 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 OR4F15Q8NGB8 312 aa11.5□□□□□ -0.57
VDR-208ENST00000550325 LTBP3Q9NS15 1303 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 TCRBV16S1A1N1A0A5B0 115 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 DRGXA6NNA5 263 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 CCR7P32248 378 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 SLC11A2P49281 568 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 GBX2P52951 348 aaPredicted RBP11.49□□□□□ -0.57
VDR-208ENST00000550325 RPS13P62277 151 aaKnown RBP11.49□□□□□ -0.57
VDR-208ENST00000550325 SYT14P1Q58G82 188 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 CLLU1Q5K131 121 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 ACSM5Q6NUN0 579 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 WASH2PQ6VEQ5 465 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 LRRC70Q7Z2Q7 622 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 TSPAN33Q86UF1 283 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 KLBQ86Z14 1044 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 GPALPP1Q8IXQ4 340 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 GIMAP1Q8WWP7 306 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 PARK7Q99497 189 aaKnown RBP11.49□□□□□ -0.57
VDR-208ENST00000550325 GPATCH2Q9NW75 528 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 TRIP12Q14669 1992 aaPredicted RBP11.49□□□□□ -0.57
VDR-208ENST00000550325 PIKFYVEQ9Y2I7 2098 aa11.49□□□□□ -0.57
VDR-208ENST00000550325 PRRC2BQ5JSZ5 2229 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms