RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 CPT1CQ8TCG5 803 aa10.4□□□□□ -0.74
RAB5B-208ENST00000550283 GFM2Q969S9 779 aaKnown RBP10.4□□□□□ -0.74
RAB5B-208ENST00000550283 EXOSC8Q96B26 276 aaKnown RBP10.4□□□□□ -0.74
RAB5B-208ENST00000550283 FBXL20Q96IG2 436 aa10.4□□□□□ -0.74
RAB5B-208ENST00000550283 ATP6V1G3Q96LB4 118 aa10.4□□□□□ -0.74
RAB5B-208ENST00000550283 ZNF354BQ96LW1 612 aa10.4□□□□□ -0.74
RAB5B-208ENST00000550283 BARD1Q99728 777 aaKnown RBP10.4□□□□□ -0.74
RAB5B-208ENST00000550283 PAIP2Q9BPZ3 127 aaKnown RBP10.4□□□□□ -0.74
RAB5B-208ENST00000550283 RNF32Q9H0A6 362 aa10.4□□□□□ -0.74
RAB5B-208ENST00000550283 LRTM1Q9HBL6 345 aa10.4□□□□□ -0.74
RAB5B-208ENST00000550283 KLHL1Q9NR64 748 aa10.4□□□□□ -0.74
RAB5B-208ENST00000550283 AHSPQ9NZD4 102 aa10.4□□□□□ -0.74
RAB5B-208ENST00000550283 MAT2BQ9NZL9 334 aa10.4□□□□□ -0.74
RAB5B-208ENST00000550283 MAP10Q9P2G4 905 aa10.4□□□□□ -0.74
RAB5B-208ENST00000550283 G3BP2Q9UN86 482 aaKnown RBP10.4□□□□□ -0.74
RAB5B-208ENST00000550283 GNG14A0A1W2PPG7 69 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 C1orf226A1L170 272 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 PINLYPA6NC86 204 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 TCP11X1B4DZS4 312 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 NPIPB8E9PQR5 432 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 J3QKU1 62 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 BIRC5O15392 142 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 OR10H2O60403 315 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 PEX11AO75192 247 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 SEC22BO75396 215 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 ITGA10O75578 1167 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 ZWINTO95229 277 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 LRATO95237 230 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 CBX7O95931 251 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 PCSK2P16519 638 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 EFNA1P20827 205 aaPredicted RBP10.39□□□□□ -0.75
RAB5B-208ENST00000550283 MST1P26927 711 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 PIK3R1P27986 724 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 TLX1P31314 330 aaPredicted RBP10.39□□□□□ -0.75
RAB5B-208ENST00000550283 SOX3P41225 446 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 RPL38P63173 70 aaKnown RBP10.39□□□□□ -0.75
RAB5B-208ENST00000550283 PLIN5Q00G26 463 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 C2orf80Q0P641 193 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 NR6A1Q15406 480 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 MEP1AQ16819 746 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 IMPG1Q17R60 797 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 SPRED3Q2MJR0 410 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 PRICKLE4Q2TBC4 344 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 GALNTL6Q49A17 601 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 TRMT12Q53H54 448 aaKnown RBP10.39□□□□□ -0.75
RAB5B-208ENST00000550283 RNFT1Q5M7Z0 435 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 RNF165Q6ZSG1 346 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 CROCCP2Q86T23 111 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 DDIASQ8IXT1 998 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 CLYBLQ8N0X4 340 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 SLC5A8Q8N695 610 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 ARFGAP2Q8N6H7 521 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 ZNF441Q8N8Z8 693 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 GRHL3Q8TE85 626 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 RIT1Q92963 219 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 KLHL29Q96CT2 875 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 TSSK3Q96PN8 268 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 RASL10BQ96S79 203 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 C1orf50Q9BV19 199 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.39□□□□□ -0.75
RAB5B-208ENST00000550283 DEPPQ9NTK1 212 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 C1orf109Q9NX04 203 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 MYOTQ9UBF9 498 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 ZNF639Q9UID6 485 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 UTS2RQ9UKP6 389 aa10.39□□□□□ -0.75
RAB5B-208ENST00000550283 DYTNA2CJ06 578 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 BLACEA4D250 179 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 ERICH4A6NGS2 130 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 G3V3Y1 287 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 SLC28A1O00337 649 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 AKAP10O43572 662 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 PRAMEF2O60811 474 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 SNNO75324 88 aaPredicted RBP10.38□□□□□ -0.75
RAB5B-208ENST00000550283 ZFAND5O76080 213 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 HSPA4LO95757 839 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 BCKDHAP12694 445 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 PORP16435 677 aaPredicted RBP10.38□□□□□ -0.75
RAB5B-208ENST00000550283 NT5EP21589 574 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 GNLYP22749 145 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 TRHRP34981 398 aaPredicted RBP10.38□□□□□ -0.75
RAB5B-208ENST00000550283 RFC3P40938 356 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 SLC1A6P48664 564 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 NAA20P61599 178 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 TRA2BP62995 288 aaKnown RBP10.38□□□□□ -0.75
RAB5B-208ENST00000550283 ZNF763Q0D2J5 394 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 FUT7Q11130 342 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 ASPHQ12797 758 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 EBPQ15125 230 aaKnown RBP10.38□□□□□ -0.75
RAB5B-208ENST00000550283 TLR1Q15399 786 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 PDCD2Q16342 344 aaPredicted RBP10.38□□□□□ -0.75
RAB5B-208ENST00000550283 NNATQ16517 81 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 ZNF766Q5HY98 468 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 C6orf136Q5SQH8 315 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 FHL5Q5TD97 284 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 ZNF324BQ6AW86 544 aaPredicted RBP10.38□□□□□ -0.75
RAB5B-208ENST00000550283 HSDL2Q6YN16 418 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 MAVSQ7Z434 540 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 HPS6Q86YV9 775 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 TICAM1Q8IUC6 712 aa10.38□□□□□ -0.75
RAB5B-208ENST00000550283 CCDC116Q8IYX3 515 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms