RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	PSMA8	Q8TAA3	256 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	SUN3	Q8TAQ9	357 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	SFXN5	Q8TD22	340 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	ZNF675	Q8TD23	568 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	FAM122A	Q96E09	287 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	ART5	Q96L15	291 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	SLC46A1	Q96NT5	459 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	ANKRD27	Q96NW4	1050 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	ADAP2	Q9NPF8	381 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	THSD1	Q9NS62	852 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	ZCCHC3	Q9NUD5	404 aa	Known RBP	10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	DDX18	Q9NVP1	670 aa	Known RBP	10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	VAPA	Q9P0L0	249 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	PTGFRN	Q9P2B2	879 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	C19orf25	Q9UFG5	118 aa	Predicted RBP	10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	C3orf18	Q9UK00	162 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	PCDHB14	Q9Y5E9	798 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	GVINP1	Q7Z2Y8	2422 aa		10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	10.89	□□□□□ -0.67
CNOT2-223	ENST00000550160	WDFY4	Q6ZS81	3184 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160		A0A087WV62	115 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	TCRBV16S1A1N1	A0A5B0	115 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	CFAP73	A6NFT4	308 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	PLOD2	O00469	737 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	EMC8	O43402	210 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	BRINP1	O60477	761 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	COQ9	O75208	318 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	BCAS2	O75934	225 aa	Predicted RBP	10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	SLC6A2	P23975	617 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	PGM1	P36871	562 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	FOLR3	P41439	243 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	MAGEA8	P43361	318 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	CDK9	P50750	372 aa	Known RBP	10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	SLC7A2	P52569	658 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	TXNL4A	P83876	142 aa	Known RBP	10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	VAC14	Q08AM6	782 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	GAB1	Q13480	694 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	ELAVL1	Q15717	326 aa	Known RBP	10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	LTB4R	Q15722	352 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	RUNDC3A	Q59EK9	446 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	SAMD4B	Q5PRF9	694 aa	Known RBP	10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	CPZ	Q66K79	652 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	NANOGP8	Q6NSW7	305 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	C8orf82	Q6P1X6	216 aa	Predicted RBP	10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	FAM199X	Q6PEV8	388 aa	Predicted RBP	10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	TMEM107	Q6UX40	140 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	ASRGL1	Q7L266	308 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	VWA5B2	Q8N398	1253 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	RIT1	Q92963	219 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	NXPE2	Q96DL1	559 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	ELP4	Q96EB1	424 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	VPS50	Q96JG6	964 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	MS4A4E	Q96PG1	132 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	CDRT15	Q96T59	188 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	ECSIT	Q9BQ95	431 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	GPATCH1	Q9BRR8	931 aa	Known RBP	10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	SLC39A3	Q9BRY0	314 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	THTPA	Q9BU02	230 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	SOX17	Q9H6I2	414 aa	Predicted RBP	10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	CXorf36	Q9H7Y0	433 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	NANOG	Q9H9S0	305 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	TPT1P8	Q9HAU6	139 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	NECTIN3	Q9NQS3	549 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	SLC25A37	Q9NYZ2	338 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	SLAMF8	Q9P0V8	285 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	PTRH2	Q9Y3E5	179 aa	Known RBP	10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	CLCA3P	Q9Y6N3	262 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	USP34	Q70CQ2	3546 aa		10.88	□□□□□ -0.67
CNOT2-223	ENST00000550160	KNTC1	P50748	2209 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	TRBV5-3	A0A0A0MS03	114 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	TEX51	A0A1B0GUA7	166 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160		A0A1W2PS29	197 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	CDRT15L2	A8MXV6	281 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	C21orf140	B9A014	251 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	GSC2	O15499	205 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	PLOD3	O60568	738 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	RAD1	O60671	282 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	ALOX12B	O75342	701 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	DXO	O77932	396 aa	Known RBP	10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	STAMBP	O95630	424 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	IGHE	P01854	428 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	HOXB9	P17482	250 aa	Predicted RBP	10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	TCN2	P20062	427 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	PTPN6	P29350	595 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	MC3R	P41968	323 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	EEFSEC	P57772	596 aa	Known RBP	10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	OR4D2	P58180	307 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	MTPN	P58546	118 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	DUSP2	Q05923	314 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	MAP4K2	Q12851	820 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	FADD	Q13158	208 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	TP53BP2	Q13625	1128 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	PRICKLE4	Q2TBC4	344 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	GTDC1	Q4AE62	458 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	RABL3	Q5HYI8	236 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	DMRTA1	Q5VZB9	504 aa		10.87	□□□□□ -0.67
CNOT2-223	ENST00000550160	LCN10	Q6JVE6	187 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms