RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 ALPK1Q96QP1 1244 aa14.12□□□□□ -0.15
RAB5C-205ENST00000550013 PELOQ9BRX2 385 aaKnown RBP14.12□□□□□ -0.15
RAB5C-205ENST00000550013 ADGRE2Q9UHX3 823 aa14.12□□□□□ -0.15
RAB5C-205ENST00000550013 SLC6A5Q9Y345 797 aa14.12□□□□□ -0.15
RAB5C-205ENST00000550013 ABCA2Q9BZC7 2435 aa14.12□□□□□ -0.15
RAB5C-205ENST00000550013 A0A0A6YYD5 115 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 LRRC14BA6NHZ5 514 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 OR6C76A6NM76 312 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 CCDC188H7C350 402 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 KERAO60938 352 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 AIFM1O95831 613 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 NR2F6P10588 404 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 EPB42P16452 691 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 BSGP35613 385 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 TIMP3P35625 211 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 PIK3CBP42338 1070 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 CDK9P50750 372 aaKnown RBP14.11□□□□□ -0.15
RAB5C-205ENST00000550013 AGFG1P52594 562 aaKnown RBP14.11□□□□□ -0.15
RAB5C-205ENST00000550013 GPX6P59796 221 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 ADAM8P78325 824 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 SLMAPQ14BN4 828 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 DAZAP2Q15038 168 aaPredicted RBP14.11□□□□□ -0.15
RAB5C-205ENST00000550013 RPS6KA2Q15349 733 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 DCST1Q5T197 706 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 FNDC7Q5VTL7 733 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 TMEM198Q66K66 360 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 RAPH1Q70E73 1250 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 MAATS1Q7Z4T9 603 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 TAGAPQ8N103 731 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 MBD6Q96DN6 1003 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 LRRC46Q96FV0 321 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 RILPQ96NA2 401 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 GNRHR2Q96P88 292 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 CENPKQ9BS16 269 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 DPH5Q9H2P9 285 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 EPB41L4BQ9H329 900 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 KCNF1Q9H3M0 494 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 NMRAL1Q9HBL8 299 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 MTRF1LQ9UGC7 380 aaKnown RBP14.11□□□□□ -0.15
RAB5C-205ENST00000550013 CAMK2AQ9UQM7 478 aa14.11□□□□□ -0.15
RAB5C-205ENST00000550013 RPH3AQ9Y2J0 694 aaPredicted RBP14.11□□□□□ -0.15
RAB5C-205ENST00000550013 C2orf92A0A1B0GVN3 265 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 ANKRD33BA6NCL7 494 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 TP53I11O14683 189 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 IL2RAP01589 272 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 GBAP04062 536 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 HPNP05981 417 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 FAM58BPP0C7Q3 252 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 MTHFD2P13995 350 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 SPRP35270 261 aaPredicted RBP14.1□□□□□ -0.15
RAB5C-205ENST00000550013 TBCELQ5QJ74 424 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 NSUN5P2Q63ZY6 315 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 VASNQ6EMK4 673 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 CYP20A1Q6UW02 462 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 C3orf62Q6ZUJ4 267 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 PPM1NQ8N819 430 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 LINC01560Q8TB33 94 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 SPPL2AQ8TCT8 520 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 ANGPTL4Q9BY76 406 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 PRDM14Q9GZV8 571 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 UBQLN3Q9H347 655 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 DDX31Q9H8H2 851 aaKnown RBP14.1□□□□□ -0.15
RAB5C-205ENST00000550013 LYARQ9NX58 379 aaKnown RBP14.1□□□□□ -0.15
RAB5C-205ENST00000550013 TEX10Q9NXF1 929 aaPredicted RBP14.1□□□□□ -0.15
RAB5C-205ENST00000550013 ZNF629Q9UEG4 869 aaPredicted RBP14.1□□□□□ -0.15
RAB5C-205ENST00000550013 EDARQ9UNE0 448 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 C15orf41Q9Y2V0 281 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 ANGPTL3Q9Y5C1 460 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 NPFFR2Q9Y5X5 522 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 SAR1BQ9Y6B6 198 aa14.1□□□□□ -0.15
RAB5C-205ENST00000550013 NSD1Q96L73 2696 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-205ENST00000550013 DNHD1Q96M86 4753 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 TUBAL3A6NHL2 446 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 PGRMC2O15173 223 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 ATE1O95260 518 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 RAF1P04049 648 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 LTA4HP09960 611 aaKnown RBP14.09□□□□□ -0.15
RAB5C-205ENST00000550013 CT62P0C5K7 136 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 SLC35E2P0CK97 266 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 PTX3P26022 381 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-205ENST00000550013 GALNSP34059 522 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 MASP1P48740 699 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 KBTBD12Q3ZCT8 623 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 EIPR1Q53HC9 387 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 GRTP1Q5TC63 336 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 FBXW10Q5XX13 1052 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 CYS1Q717R9 158 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 CAMKMTQ7Z624 323 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 TBC1D1Q86TI0 1168 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-205ENST00000550013 PM20D2Q8IYS1 436 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 PRR22Q8IZ63 422 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 WFDC11Q8NEX6 87 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 KCTD4Q8WVF5 259 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 NXNL1Q96CM4 212 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 HSPBAP1Q96EW2 488 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 TRIB1Q96RU8 372 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 UGT2B28Q9BY64 529 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 ACTR8Q9H981 624 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 CXorf21Q9HAI6 301 aa14.09□□□□□ -0.15
RAB5C-205ENST00000550013 SNX15Q9NRS6 342 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms