RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 ENO4A6NNW6 628 aa15.05■□□□□ -0
VPS29-207ENST00000549970 RIPK2O43353 540 aa15.05■□□□□ -0
VPS29-207ENST00000549970 OR4F21O95013 312 aa15.05■□□□□ -0
VPS29-207ENST00000549970 LRATO95237 230 aa15.05■□□□□ -0
VPS29-207ENST00000549970 FBXO45P0C2W1 286 aa15.05■□□□□ -0
VPS29-207ENST00000549970 CT62P0C5K7 136 aa15.05■□□□□ -0
VPS29-207ENST00000549970 RHOXF2BP0C7M4 288 aa15.05■□□□□ -0
VPS29-207ENST00000549970 TAC1P20366 129 aa15.05■□□□□ -0
VPS29-207ENST00000549970 SERPINB3P29508 390 aa15.05■□□□□ -0
VPS29-207ENST00000549970 GALNSP34059 522 aa15.05■□□□□ -0
VPS29-207ENST00000549970 KIR3DL1P43629 444 aa15.05■□□□□ -0
VPS29-207ENST00000549970 XKP51811 444 aa15.05■□□□□ -0
VPS29-207ENST00000549970 MAPK12P53778 367 aa15.05■□□□□ -0
VPS29-207ENST00000549970 KCNJ2P63252 427 aa15.05■□□□□ -0
VPS29-207ENST00000549970 TMEM211Q6ICI0 200 aa15.05■□□□□ -0
VPS29-207ENST00000549970 ADGRD1Q6QNK2 874 aa15.05■□□□□ -0
VPS29-207ENST00000549970 TIFABQ6ZNK6 161 aa15.05■□□□□ -0
VPS29-207ENST00000549970 TRILQ7L0X0 811 aa15.05■□□□□ -0
VPS29-207ENST00000549970 TRMT10CQ7L0Y3 403 aaKnown RBP15.05■□□□□ -0
VPS29-207ENST00000549970 COMMD6Q7Z4G1 85 aa15.05■□□□□ -0
VPS29-207ENST00000549970 PAQR8Q8TEZ7 354 aa15.05■□□□□ -0
VPS29-207ENST00000549970 MTBPQ96DY7 904 aa15.05■□□□□ -0
VPS29-207ENST00000549970 RHOXF2Q9BQY4 288 aa15.05■□□□□ -0
VPS29-207ENST00000549970 C1QTNF3Q9BXJ4 246 aa15.05■□□□□ -0
VPS29-207ENST00000549970 LDAHQ9H6V9 325 aa15.05■□□□□ -0
VPS29-207ENST00000549970 PNPLA3Q9NST1 481 aa15.05■□□□□ -0
VPS29-207ENST00000549970 ZNF225Q9UK10 706 aa15.05■□□□□ -0
VPS29-207ENST00000549970 SNX6Q9UNH7 406 aa15.05■□□□□ -0
VPS29-207ENST00000549970 NINQ8N4C6 2090 aa15.05■□□□□ -0
VPS29-207ENST00000549970 DCHS2Q6V1P9 2916 aa15.04■□□□□ -0
VPS29-207ENST00000549970 C2orf92A0A1B0GVN3 265 aa15.04■□□□□ -0
VPS29-207ENST00000549970 SUPT7LO94864 414 aa15.04■□□□□ -0
VPS29-207ENST00000549970 IGHG3P01860 377 aa15.04■□□□□ -0
VPS29-207ENST00000549970 NT5EP21589 574 aa15.04■□□□□ -0
VPS29-207ENST00000549970 HSD17B3P37058 310 aa15.04■□□□□ -0
VPS29-207ENST00000549970 CLCQ05315 142 aa15.04■□□□□ -0
VPS29-207ENST00000549970 GALNT1Q10472 559 aaPredicted RBP15.04■□□□□ -0
VPS29-207ENST00000549970 SLC10A1Q14973 349 aa15.04■□□□□ -0
VPS29-207ENST00000549970 HYAL4Q2M3T9 481 aa15.04■□□□□ -0
VPS29-207ENST00000549970 GXYLT1Q4G148 440 aa15.04■□□□□ -0
VPS29-207ENST00000549970 TCHHL1Q5QJ38 904 aaPredicted RBP15.04■□□□□ -0
VPS29-207ENST00000549970 C6orf163Q5TEZ5 329 aa15.04■□□□□ -0
VPS29-207ENST00000549970 HLA-DQA1Q5Y7H0 255 aa15.04■□□□□ -0
VPS29-207ENST00000549970 TMEM64Q6YI46 380 aa15.04■□□□□ -0
VPS29-207ENST00000549970 DND1Q8IYX4 353 aaKnown RBP15.04■□□□□ -0
VPS29-207ENST00000549970 TAGAPQ8N103 731 aa15.04■□□□□ -0
VPS29-207ENST00000549970 MMP21Q8N119 569 aa15.04■□□□□ -0
VPS29-207ENST00000549970 FBXW8Q8N3Y1 598 aa15.04■□□□□ -0
VPS29-207ENST00000549970 CDYL2Q8N8U2 506 aa15.04■□□□□ -0
VPS29-207ENST00000549970 MYRIPQ8NFW9 859 aa15.04■□□□□ -0
VPS29-207ENST00000549970 JSRP1Q96MG2 331 aaPredicted RBP15.04■□□□□ -0
VPS29-207ENST00000549970 TRIM8Q9BZR9 551 aa15.04■□□□□ -0
VPS29-207ENST00000549970 EXO5Q9H790 373 aa15.04■□□□□ -0
VPS29-207ENST00000549970 BRF2Q9HAW0 419 aa15.04■□□□□ -0
VPS29-207ENST00000549970 TRPS1Q9UHF7 1281 aa15.04■□□□□ -0
VPS29-207ENST00000549970 BOKQ9UMX3 212 aaPredicted RBP15.04■□□□□ -0
VPS29-207ENST00000549970 PCDHA9Q9Y5H5 950 aa15.04■□□□□ -0
VPS29-207ENST00000549970 CHCHD2Q9Y6H1 151 aaPredicted RBP15.04■□□□□ -0
VPS29-207ENST00000549970 PHF3Q92576 2039 aaKnown RBP15.04■□□□□ -0
VPS29-207ENST00000549970 OR14I1A6ND48 311 aa15.03■□□□□ -0
VPS29-207ENST00000549970 GOLGA8RI6L899 631 aa15.03■□□□□ -0
VPS29-207ENST00000549970 BCKDKO14874 412 aa15.03■□□□□ -0
VPS29-207ENST00000549970 FAM153BP0C7A2 387 aa15.03■□□□□ -0
VPS29-207ENST00000549970 RFPL3SP0C7P2 107 aa15.03■□□□□ -0
VPS29-207ENST00000549970 CPMP14384 443 aa15.03■□□□□ -0
VPS29-207ENST00000549970 MAN2A2P49641 1150 aa15.03■□□□□ -0
VPS29-207ENST00000549970 NUP107P57740 925 aa15.03■□□□□ -0
VPS29-207ENST00000549970 PMPCAQ10713 525 aa15.03■□□□□ -0
VPS29-207ENST00000549970 FUT7Q11130 342 aa15.03■□□□□ -0
VPS29-207ENST00000549970 TBL3Q12788 808 aaKnown RBP15.03■□□□□ -0
VPS29-207ENST00000549970 NTRK2Q16620 822 aa15.03■□□□□ -0
VPS29-207ENST00000549970 FAM153CQ494X1 144 aa15.03■□□□□ -0
VPS29-207ENST00000549970 UNC50Q53HI1 259 aa15.03■□□□□ -0
VPS29-207ENST00000549970 ZNF678Q5SXM1 525 aa15.03■□□□□ -0
VPS29-207ENST00000549970 ZNF585AQ6P3V2 769 aa15.03■□□□□ -0
VPS29-207ENST00000549970 GSPT2Q8IYD1 628 aaKnown RBP15.03■□□□□ -0
VPS29-207ENST00000549970 ZNF441Q8N8Z8 693 aa15.03■□□□□ -0
VPS29-207ENST00000549970 ASB5Q8WWX0 329 aa15.03■□□□□ -0
VPS29-207ENST00000549970 RND1Q92730 232 aa15.03■□□□□ -0
VPS29-207ENST00000549970 TMEM237Q96Q45 408 aa15.03■□□□□ -0
VPS29-207ENST00000549970 OR10A5Q9H207 317 aa15.03■□□□□ -0
VPS29-207ENST00000549970 ZNF703Q9H7S9 590 aaPredicted RBP15.03■□□□□ -0
VPS29-207ENST00000549970 PROK2Q9HC23 129 aa15.03■□□□□ -0
VPS29-207ENST00000549970 ZFP64Q9NPA5 681 aa15.03■□□□□ -0
VPS29-207ENST00000549970 CNIH4Q9P003 139 aa15.03■□□□□ -0
VPS29-207ENST00000549970 ACAD8Q9UKU7 415 aa15.03■□□□□ -0
VPS29-207ENST00000549970 RNF6Q9Y252 685 aa15.03■□□□□ -0
VPS29-207ENST00000549970 NCKAP5O14513 1909 aa15.03■□□□□ -0
VPS29-207ENST00000549970 AKAP9Q99996 3911 aa15.02■□□□□ -0
VPS29-207ENST00000549970 A0A1B0GVC2 190 aa15.02■□□□□ -0
VPS29-207ENST00000549970 C1orf226A1L170 272 aa15.02■□□□□ -0
VPS29-207ENST00000549970 FIGNL2A6NMB9 653 aa15.02■□□□□ -0
VPS29-207ENST00000549970 FAM90A27PA6NNH2 459 aa15.02■□□□□ -0
VPS29-207ENST00000549970 AQP7O14520 342 aa15.02■□□□□ -0
VPS29-207ENST00000549970 DLX3O60479 287 aa15.02■□□□□ -0
VPS29-207ENST00000549970 GUCY1B2O75343 617 aa15.02■□□□□ -0
VPS29-207ENST00000549970 ERAL1O75616 437 aaKnown RBP15.02■□□□□ -0
VPS29-207ENST00000549970 PORP16435 677 aaPredicted RBP15.02■□□□□ -0
VPS29-207ENST00000549970 CHRNB4P30926 498 aa15.02■□□□□ -0
VPS29-207ENST00000549970 DEKP35659 375 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms