RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 MKL2Q9ULH7 1088 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 ERVK-11Q9UQG0 969 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 NEUROG3Q9Y4Z2 214 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 CLDN16Q9Y5I7 305 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.3■□□□□ 0.2
LETMD1-220ENST00000549686 PTPRZ1P23471 2315 aaPredicted RBP16.3■□□□□ 0.2
LETMD1-220ENST00000549686 WDR87Q6ZQQ6 2873 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 PLOD3O60568 738 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 BCAS2O75934 225 aaPredicted RBP16.29■□□□□ 0.2
LETMD1-220ENST00000549686 HEXBP07686 556 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 RAB40ALP0C0E4 278 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 HSD17B1P14061 328 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 GPX2P18283 190 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 MAOAP21397 527 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 ID2Q02363 134 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 DUSP2Q05923 314 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 MAP4K2Q12851 820 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 FADDQ13158 208 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 NCF4Q15080 339 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 ZNF628Q5EBL2 1059 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 PIGGQ5H8A4 983 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 MLIPQ5VWP3 458 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 SAXO2Q658L1 398 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 PGM2L1Q6PCE3 622 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 FAM198BQ6UWH4 519 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 GALNT12Q8IXK2 581 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 ULK2Q8IYT8 1036 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 TNIP2Q8NFZ5 429 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 OR52N2Q8NGI0 321 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 RIT1Q92963 219 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 VN1R1Q9GZP7 353 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 ADAP2Q9NPF8 381 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 NECTIN3Q9NQS3 549 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 ZCCHC3Q9NUD5 404 aaKnown RBP16.29■□□□□ 0.2
LETMD1-220ENST00000549686 CMTM6Q9NX76 183 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 DLL3Q9NYJ7 618 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 PADI2Q9Y2J8 665 aa16.29■□□□□ 0.2
LETMD1-220ENST00000549686 A0A1W2PS29 197 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 TCRBV16S1A1N1A0A5B0 115 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 NME4O00746 187 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 RECKO95980 971 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 IFNA16P05015 189 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 ME2P23368 584 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 MC3RP41968 323 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 EMP2P54851 167 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 MTPNP58546 118 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 GABREP78334 506 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 ELAVL1Q15717 326 aaKnown RBP16.28■□□□□ 0.2
LETMD1-220ENST00000549686 NSDHLQ15738 373 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 PRICKLE4Q2TBC4 344 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 RABL3Q5HYI8 236 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 TMEM107Q6UX40 140 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 SERPINA11Q86U17 422 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 SHISA5Q8N114 240 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 OR2L13Q8N349 312 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 METTL21AQ8WXB1 218 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 CTHRC1Q96CG8 243 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 FAM120BQ96EK7 910 aaKnown RBP16.28■□□□□ 0.2
LETMD1-220ENST00000549686 SLC46A1Q96NT5 459 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 SPSB2Q99619 263 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 NRSN2Q9GZP1 204 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 ALG2Q9H553 416 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 EPS8L2Q9H6S3 715 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 KAT8Q9H7Z6 458 aaKnown RBP16.28■□□□□ 0.2
LETMD1-220ENST00000549686 CXorf21Q9HAI6 301 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 DDX18Q9NVP1 670 aaKnown RBP16.28■□□□□ 0.2
LETMD1-220ENST00000549686 THUMPD1Q9NXG2 353 aaKnown RBP16.28■□□□□ 0.2
LETMD1-220ENST00000549686 MAT2BQ9NZL9 334 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 C19orf25Q9UFG5 118 aaPredicted RBP16.28■□□□□ 0.2
LETMD1-220ENST00000549686 CD300AQ9UGN4 299 aa16.28■□□□□ 0.2
LETMD1-220ENST00000549686 PMS2P1A4D2B8 440 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 IDSB3KWA1 339 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 STMND1H3BQB6 276 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 TGFBR3LH3BV60 316 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 COQ9O75208 318 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 CIB2O75838 187 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 SOX30O94993 753 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 IGHEP01854 428 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 SLC5A2P31639 672 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 KCNJ2P63252 427 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 LIPEQ05469 1076 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 BNIP2Q12982 314 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 GPR155Q7Z3F1 870 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 C6orf120Q7Z4R8 191 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 NLGN4XQ8N0W4 816 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 VWA5B2Q8N398 1253 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 NLGN4YQ8NFZ3 816 aaPredicted RBP16.27■□□□□ 0.2
LETMD1-220ENST00000549686 OR14A16Q8NHC5 309 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 DAZLQ92904 295 aaKnown RBP16.27■□□□□ 0.2
LETMD1-220ENST00000549686 AURKBQ96GD4 344 aaPredicted RBP16.27■□□□□ 0.2
LETMD1-220ENST00000549686 ART5Q96L15 291 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 MS4A4EQ96PG1 132 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 CRB3Q9BUF7 120 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 MUC13Q9H3R2 512 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 FOXJ2Q9P0K8 574 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 SUCOQ9UBS9 1254 aaKnown RBP16.27■□□□□ 0.2
LETMD1-220ENST00000549686 C3orf18Q9UK00 162 aa16.27■□□□□ 0.2
LETMD1-220ENST00000549686 C19orf53Q9UNZ5 99 aaPredicted RBP16.27■□□□□ 0.2
LETMD1-220ENST00000549686 SEC16AO15027 2179 aa16.26■□□□□ 0.19
LETMD1-220ENST00000549686 FAM149AA5PLN7 773 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms