RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 NFAM1Q8NET5 270 aaPredicted RBP19.77■□□□□ 0.76
VPS29-206ENST00000549578 OR8J2Q8NGG1 315 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 OR14A16Q8NHC5 309 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 DAZLQ92904 295 aaKnown RBP19.77■□□□□ 0.76
VPS29-206ENST00000549578 ZBED6CLQ96FA7 236 aaPredicted RBP19.77■□□□□ 0.76
VPS29-206ENST00000549578 CNPPD1Q9BV87 410 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 OR8D2Q9GZM6 311 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 FAM234BA2RU67 622 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 DDAH2O95865 285 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 PGRP06401 933 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 GALNSP34059 522 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 SOX18P35713 384 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 POLR2JP52435 117 aaKnown RBP19.76■□□□□ 0.75
VPS29-206ENST00000549578 MANFP55145 182 aaKnown RBP19.76■□□□□ 0.75
VPS29-206ENST00000549578 MRPS35P82673 323 aaKnown RBP19.76■□□□□ 0.75
VPS29-206ENST00000549578 Q0VFX4 171 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 SPRED3Q2MJR0 410 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 PRICKLE4Q2TBC4 344 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 BTBD16Q32M84 506 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 CPSF7Q8N684 471 aaKnown RBP19.76■□□□□ 0.75
VPS29-206ENST00000549578 ZNF321PQ8N8H1 164 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 KAT2AQ92830 837 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 FER1L6-AS2Q96M78 137 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 ACSS1Q9NUB1 689 aaPredicted RBP19.76■□□□□ 0.75
VPS29-206ENST00000549578 MAT2BQ9NZL9 334 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 ERVK-19Q9WJR5 959 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 A0A1W2PRB8 838 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 NR5A2O00482 541 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 MGAT2Q10469 447 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 TIGD2Q4W5G0 525 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 ZNF628Q5EBL2 1059 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 ANKRD46Q86W74 232 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 CLECL1Q8IZS7 167 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 B3GNT7Q8NFL0 401 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 ZFP28Q8NHY6 868 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 SLC2A12Q8TD20 617 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 CRELD1Q96HD1 420 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 SENP5Q96HI0 755 aaPredicted RBP19.76■□□□□ 0.75
VPS29-206ENST00000549578 ARMCX1Q9P291 453 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 ARL2BPQ9Y2Y0 163 aa19.76■□□□□ 0.75
VPS29-206ENST00000549578 FCHO1O14526 889 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 DYRK3O43781 588 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 SCN2BO60939 215 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 C6orf47O95873 294 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 CDK9P50750 372 aaKnown RBP19.75■□□□□ 0.75
VPS29-206ENST00000549578 RCAN2Q14206 197 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 EXT1Q16394 746 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 C6orf163Q5TEZ5 329 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 GKAP1Q5VSY0 366 aaPredicted RBP19.75■□□□□ 0.75
VPS29-206ENST00000549578 PLAG1Q6DJT9 500 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 TMEM107Q6UX40 140 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 GK5Q6ZS86 529 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 MTDHQ86UE4 582 aaKnown RBP19.75■□□□□ 0.75
VPS29-206ENST00000549578 VWA5B2Q8N398 1253 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 KIF2BQ8N4N8 673 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 NATD1Q8N6N6 113 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 TMEM102Q8N9M5 508 aaPredicted RBP19.75■□□□□ 0.75
VPS29-206ENST00000549578 APCDD1LQ8NCL9 501 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 MORN4Q8NDC4 146 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 NCLNQ969V3 563 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 VPS33AQ96AX1 596 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 FBXL20Q96IG2 436 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 OR52E6Q96RD3 313 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 ANKRA2Q9H9E1 313 aa19.75■□□□□ 0.75
VPS29-206ENST00000549578 MED13Q9UHV7 2174 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 MGAQ8IWI9 3026 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 IL6P05231 212 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 SSTR4P31391 388 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 GPC1P35052 558 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 MC3RP41968 323 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 GPR143P51810 404 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 RRADP55042 308 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 KCNK10P57789 538 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 MAP4K2Q12851 820 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 TRMT12Q53H54 448 aaKnown RBP19.74■□□□□ 0.75
VPS29-206ENST00000549578 BLOC1S3Q6QNY0 202 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 CLEC1AQ8NC01 280 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 SIMC1Q8NDZ2 872 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 OR1N1Q8NGS0 311 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 ZNF675Q8TD23 568 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 ZNF721Q8TF20 911 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 CTHRC1Q96CG8 243 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 NUDT9Q9BW91 350 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 ING2Q9H160 280 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 ATP13A2Q9NQ11 1180 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 PPIEQ9UNP9 301 aaKnown RBP19.74■□□□□ 0.75
VPS29-206ENST00000549578 KCNMB2Q9Y691 235 aa19.74■□□□□ 0.75
VPS29-206ENST00000549578 RNASET2O00584 256 aaKnown RBP19.73■□□□□ 0.75
VPS29-206ENST00000549578 NDUFAB1O14561 156 aa19.73■□□□□ 0.75
VPS29-206ENST00000549578 CFLARO15519 480 aa19.73■□□□□ 0.75
VPS29-206ENST00000549578 CCDC22O60826 627 aa19.73■□□□□ 0.75
VPS29-206ENST00000549578 IGKV3-11P04433 115 aa19.73■□□□□ 0.75
VPS29-206ENST00000549578 ABCB1P08183 1280 aaPredicted RBP19.73■□□□□ 0.75
VPS29-206ENST00000549578 S1PR1P21453 382 aa19.73■□□□□ 0.75
VPS29-206ENST00000549578 KLF10Q13118 480 aa19.73■□□□□ 0.75
VPS29-206ENST00000549578 EXOSC7Q15024 291 aaKnown RBP19.73■□□□□ 0.75
VPS29-206ENST00000549578 MLC1Q15049 377 aa19.73■□□□□ 0.75
VPS29-206ENST00000549578 ANXA8L1Q5VT79 327 aa19.73■□□□□ 0.75
VPS29-206ENST00000549578 OR7G2Q8NG99 324 aa19.73■□□□□ 0.75
VPS29-206ENST00000549578 M1APQ8TC57 530 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms