RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ACTR1BP42025 376 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 ACTR1AP61163 376 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 IGLV3-21P80748 117 aaPredicted RBP9.4□□□□□ -0.9
RAB5B-206ENST00000549505 PLCL1Q15111 1095 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 DUSP7Q16829 419 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 PRRT3Q5FWE3 981 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 UBE2UQ5VVX9 321 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 LAIR1Q6GTX8 287 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 TCTN3Q6NUS6 607 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 ANKRD13BQ86YJ7 626 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 TOR1AIP2Q8NFQ8 470 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 OR10G2Q8NGC3 310 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 CCL4L1Q8NHW4 92 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 OIT3Q8WWZ8 545 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 FGF11Q92914 225 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 ZFYVE21Q9BQ24 234 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 OR51I1Q9H343 314 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 POLE3Q9NRF9 147 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 GALNT8Q9NY28 637 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 REV1Q9UBZ9 1251 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 PSME2Q9UL46 239 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 DAPP1Q9UN19 280 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 SATB2Q9UPW6 733 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 MGAT4BQ9UQ53 548 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 ZW10O43264 779 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 PFDN1O60925 122 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 NR2F6P10588 404 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 PIPP12273 146 aaPredicted RBP9.4□□□□□ -0.9
RAB5B-206ENST00000549505 MATN1P21941 496 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 PRKAR1BP31321 381 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 LIMK1P53667 647 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 LIM2P55344 173 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 SNRPGP62308 76 aaKnown RBP9.4□□□□□ -0.9
RAB5B-206ENST00000549505 RPP38P78345 283 aaKnown RBP9.4□□□□□ -0.9
RAB5B-206ENST00000549505 PRR5P85299 388 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 EFNB1P98172 346 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 DUSP2Q05923 314 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 IRF3Q14653 427 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 MEP1AQ16819 746 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 PUS10Q3MIT2 529 aaKnown RBP9.4□□□□□ -0.9
RAB5B-206ENST00000549505 TJAP1Q5JTD0 557 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 ABHD13Q7L211 337 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 GALNT10Q86SR1 603 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 ENTHD1Q8IYW4 607 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 OR4E2Q8NGC2 313 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 OR8K5Q8NH50 307 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 UCN3Q969E3 161 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 CTHRC1Q96CG8 243 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 TREX2Q9BQ50 279 aaPredicted RBP9.4□□□□□ -0.9
RAB5B-206ENST00000549505 SEMA6CQ9H3T2 930 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 UBE2ZQ9H832 354 aaPredicted RBP9.4□□□□□ -0.9
RAB5B-206ENST00000549505 SEMA5BQ9P283 1151 aa9.4□□□□□ -0.9
RAB5B-206ENST00000549505 GSAPA4D1B5 854 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 OR5K3A6NET4 321 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 CYR61O00622 381 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 PPM1DO15297 605 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 NARSO43776 548 aaKnown RBP9.4□□□□□ -0.91
RAB5B-206ENST00000549505 SLC35G6P0C7Q6 338 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 GALNSP34059 522 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 SLC15A1P46059 708 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 GABRA4P48169 554 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 NCBP2P52298 156 aaKnown RBP eCLIP9.4□□□□□ -0.916e-8■□□□□ 11.3
RAB5B-206ENST00000549505 CRISP3P54108 245 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 ILKQ13418 452 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 NDUFA9Q16795 377 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 PRTGQ2VWP7 1150 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 ZNF628Q5EBL2 1059 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 CDC73Q6P1J9 531 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 CACUL1Q86Y37 369 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 SLC5A8Q8N695 610 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 OR5AK3PQ8NH89 298 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 SLC35B4Q969S0 331 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 EXOSC8Q96B26 276 aaKnown RBP9.4□□□□□ -0.91
RAB5B-206ENST00000549505 CLDN23Q96B33 292 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 YIPF6Q96EC8 236 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 TPD52L3Q96J77 140 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 ACTRT3Q9BYD9 372 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 ING2Q9H160 280 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 C3orf14Q9HBI5 128 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 EVA1BQ9NVM1 165 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 A4GNTQ9UNA3 340 aa9.4□□□□□ -0.91
RAB5B-206ENST00000549505 PLOD3O60568 738 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 CCNB2O95067 398 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 CSF2P04141 144 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 CD27P26842 260 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 CERS1P27544 350 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 PLA2G16P53816 162 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 COX10Q12887 443 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 EXOC3L2Q2M3D2 409 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 C12orf73Q69YU5 71 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 PARGQ86W56 976 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 KRT73Q86Y46 540 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 DEPDC4Q8N2C3 294 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 C1orf216Q8TAB5 229 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 ADAMTS18Q8TE60 1221 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 RAB2BQ8WUD1 216 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 FAR1Q8WVX9 515 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 FCGR1BQ92637 280 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 TOE1Q96GM8 510 aaKnown RBP9.39□□□□□ -0.91
RAB5B-206ENST00000549505 FEVQ99581 238 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms