RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 LYRM1O43325 122 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 PROM1O43490 865 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 TRIM3O75382 744 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-228ENST00000548938 KLK1P06870 262 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 SRPRAP08240 638 aaKnown RBP13.02□□□□□ -0.33
HDAC7-228ENST00000548938 PKLRP30613 574 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 UQCRC1P31930 480 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 EVI2BP34910 448 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 WNT4P56705 351 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 FABP5Q01469 135 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 QSOX2Q6ZRP7 698 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 ARL14EPQ8N8R7 260 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-228ENST00000548938 SLC7A13Q8TCU3 470 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 GATAD2BQ8WXI9 593 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 ZC3HAV1LQ96H79 300 aaKnown RBP13.02□□□□□ -0.33
HDAC7-228ENST00000548938 TMEM19Q96HH6 336 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 MED18Q9BUE0 208 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 SORBS1Q9BX66 1292 aaKnown RBP13.02□□□□□ -0.33
HDAC7-228ENST00000548938 ZNF717Q9BY31 904 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-228ENST00000548938 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 MVB12BQ9H7P6 319 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 DMRT3Q9NQL9 472 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 SEMA3GQ9NS98 782 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 ING3Q9NXR8 418 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 TEKT2Q9UIF3 430 aa13.02□□□□□ -0.33
HDAC7-228ENST00000548938 DOCK6Q96HP0 2047 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 C5orf58C9J3I9 102 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 NPC1O15118 1278 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 IL3P08700 152 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 CD79BP40259 229 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 DGKGP49619 791 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 CLDN20P56880 219 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 RAB25P57735 213 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 ELAVL2Q12926 359 aaKnown RBP13.01□□□□□ -0.33
HDAC7-228ENST00000548938 MZT2BQ6NZ67 158 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 IL17RCQ8NAC3 791 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 DUSP18Q8NEJ0 188 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 RAB8BQ92930 207 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 PDXPQ96GD0 296 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 ZNF582Q96NG8 517 aaPredicted RBP13.01□□□□□ -0.33
HDAC7-228ENST00000548938 TOX2Q96NM4 488 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 CRISPLD2Q9H0B8 497 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 MYNNQ9NPC7 610 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 KCNE2Q9Y6J6 123 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 ANAPC1Q9H1A4 1944 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 WASHC1A8K0Z3 465 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 SLC30A4O14863 429 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 NCR1O76036 304 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 CATP04040 527 aaKnown RBP13.01□□□□□ -0.33
HDAC7-228ENST00000548938 PRKAR1AP10644 381 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 ARSBP15848 533 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 MYL12AP19105 171 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 CTSCP53634 463 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 RRAS2P62070 204 aaPredicted RBP13.01□□□□□ -0.33
HDAC7-228ENST00000548938 SNRPD1P62314 119 aaKnown RBP13.01□□□□□ -0.33
HDAC7-228ENST00000548938 TBPL1P62380 186 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 PPP3R1P63098 170 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 LSM11P83369 360 aaKnown RBP eCLIP13.01□□□□□ -0.33
HDAC7-228ENST00000548938 IL18Q14116 193 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 ACSM5Q6NUN0 579 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 Q6ZNB5 142 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 ZNF767PQ75MW2 155 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 SHFQ7M4L6 423 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 TMEM150AQ86TG1 271 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 C11orf74Q86VG3 221 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 FAM26EQ8N5C1 309 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 QRFPRQ96P65 431 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 DCLRE1CQ96SD1 692 aaKnown RBP13.01□□□□□ -0.33
HDAC7-228ENST00000548938 SOSTQ9BQB4 213 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 GTPBP2Q9BX10 602 aaKnown RBP13.01□□□□□ -0.33
HDAC7-228ENST00000548938 SPNS1Q9H2V7 528 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 TAAR2Q9P1P5 351 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 SLC23A1Q9UHI7 598 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 YIPF1Q9Y548 306 aa13.01□□□□□ -0.33
HDAC7-228ENST00000548938 CASKO14936 926 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 NOS1APO75052 506 aaPredicted RBP13□□□□□ -0.33
HDAC7-228ENST00000548938 NR2F6P10588 404 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 GAS1P54826 345 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 PIN1Q13526 163 aaPredicted RBP13□□□□□ -0.33
HDAC7-228ENST00000548938 GINS1Q14691 196 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 TXNDC8Q6A555 127 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 CREB3L2Q70SY1 520 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 TMEM159Q96B96 161 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 DHRS9Q9BPW9 319 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 POLDIP3Q9BY77 421 aaKnown RBP13□□□□□ -0.33
HDAC7-228ENST00000548938 NLNQ9BYT8 704 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 ATP13A2Q9NQ11 1180 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 ZSCAN32Q9NX65 697 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 TBX21Q9UL17 535 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 PPIL1Q9Y3C6 166 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 STK25O00506 426 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 NME6O75414 186 aaPredicted RBP13□□□□□ -0.33
HDAC7-228ENST00000548938 LATS1O95835 1130 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 ZNF30P17039 623 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 DDX5P17844 614 aaKnown RBP13□□□□□ -0.33
HDAC7-228ENST00000548938 PDHA2P29803 388 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 PBLDP30039 288 aaPredicted RBP13□□□□□ -0.33
HDAC7-228ENST00000548938 SOX18P35713 384 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 ABATP80404 500 aa13□□□□□ -0.33
HDAC7-228ENST00000548938 C22orf39Q6P5X5 142 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms