RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 FAM90A27PA6NNH2 459 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 PPP6CO00743 305 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 MSTNO14793 375 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 SMIM24O75264 130 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 KRT38O76015 456 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 AIFM1O95831 613 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 SLC35E2P0CK97 266 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 NR2F6P10588 404 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 TSPAN8P19075 237 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 ELAVL4P26378 380 aaKnown RBP6.18□□□□□ -1.42
SCAF11-211ENST00000547950 PIK3R1P27986 724 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 SERPINB3P29508 390 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 SSTR2P30874 369 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 SSTR4P31391 388 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 MAN2A2P49641 1150 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 SERPINB9P50453 376 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 XKP51811 444 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 ARFIP1P53367 373 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 CDH13P55290 713 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 KRTAP10-9P60411 292 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 FOXO1Q12778 655 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 IFT88Q13099 833 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 EMC4Q5J8M3 183 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 CCNYL2Q5T2Q4 361 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 HLA-DQA1Q5Y7H0 255 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 FRG2Q64ET8 278 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 MRM1Q6IN84 353 aaKnown RBP6.18□□□□□ -1.42
SCAF11-211ENST00000547950 RPS27LQ71UM5 84 aaKnown RBP6.18□□□□□ -1.42
SCAF11-211ENST00000547950 TRILQ7L0X0 811 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 TAOK1Q7L7X3 1001 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 NUDT13Q86X67 352 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 RELL1Q8IUW5 271 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 FAM109AQ8N4B1 249 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 MMGT1Q8N4V1 131 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 OR4F6Q8NGB9 312 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 LILRB4Q8NHJ6 448 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 NUBPLQ8TB37 319 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 WDR20Q8TBZ3 569 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 ASB5Q8WWX0 329 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 LURAP1Q96LR2 239 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 FRG2BQ96QU4 278 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 SMC6Q96SB8 1091 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 PAFAH2Q99487 392 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 FMO2Q99518 471 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 SERPINI1Q99574 410 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 SPOCK3Q9BQ16 436 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 PELOQ9BRX2 385 aaKnown RBP6.18□□□□□ -1.42
SCAF11-211ENST00000547950 MRPL1Q9BYD6 325 aaKnown RBP6.18□□□□□ -1.42
SCAF11-211ENST00000547950 TRIM8Q9BZR9 551 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 TSPYL1Q9H0U9 437 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 ELOVL6Q9H5J4 265 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 ZDHHC11Q9H8X9 412 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 KCNJ16Q9NPI9 418 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 FARSBQ9NSD9 589 aaKnown RBP6.18□□□□□ -1.42
SCAF11-211ENST00000547950 LYARQ9NX58 379 aaKnown RBP6.18□□□□□ -1.42
SCAF11-211ENST00000547950 PSD3Q9NYI0 1048 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 AHSPQ9NZD4 102 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 XPR1Q9UBH6 696 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 RNF6Q9Y252 685 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 LIPGQ9Y5X9 500 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 CREBBPQ92793 2442 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 LRBAP50851 2863 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 CRYBG3Q68DQ2 2970 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 NUP210LQ5VU65 1888 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 A0A087WUV0 522 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-211ENST00000547950 TRGV5A0A0B4J1U4 118 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 A0A1B0GTL3 188 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 C2orf92A0A1B0GVN3 265 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 A0A1W2PS29 197 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 OR14I1A6ND48 311 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 TRIM49D1C9J1S8 452 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 STX16-NPEPL1H3BU86 382 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 STX16O14662 325 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 BCKDKO14874 412 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 TRAPPC6AO75865 159 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 NADKO95544 446 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-211ENST00000547950 PDYNP01213 254 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 IGHG3P01860 377 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 SNRPAP09012 282 aaKnown RBP6.17□□□□□ -1.42
SCAF11-211ENST00000547950 RFPL3SP0C7P2 107 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 CTAGE8P0CG41 777 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 COL6A2P12110 1019 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 BMP4P12644 408 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 NT5EP21589 574 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 ACVR2AP27037 513 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 CHRNB4P30926 498 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 DEKP35659 375 aaKnown RBP6.17□□□□□ -1.42
SCAF11-211ENST00000547950 TRPC1P48995 793 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 SLC37A1P57057 533 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 NUP107P57740 925 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 TLE4Q04727 773 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 HYAL4Q2M3T9 481 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 SPRED3Q2MJR0 410 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 TSNAXIP1Q2TAA8 658 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 WLSQ5T9L3 541 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 LGSNQ5TDP6 509 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 FAM219BQ5XKK7 198 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 OR52E8Q6IFG1 317 aa6.17□□□□□ -1.42
SCAF11-211ENST00000547950 METTL2BQ6P1Q9 378 aaKnown RBP6.17□□□□□ -1.42
SCAF11-211ENST00000547950 ACAD11Q709F0 780 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms