RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 TOMM20Q15388 145 aa18.7■□□□□ 0.58
SSH1-207ENST00000547862 FAM83EQ2M2I3 478 aa18.7■□□□□ 0.58
SSH1-207ENST00000547862 HLA-DQA1Q5Y7H0 255 aa18.7■□□□□ 0.58
SSH1-207ENST00000547862 CYS1Q717R9 158 aa18.7■□□□□ 0.58
SSH1-207ENST00000547862 DND1Q8IYX4 353 aaKnown RBP18.7■□□□□ 0.58
SSH1-207ENST00000547862 TAGAPQ8N103 731 aa18.7■□□□□ 0.58
SSH1-207ENST00000547862 CDK15Q96Q40 435 aa18.7■□□□□ 0.58
SSH1-207ENST00000547862 RAB17Q9H0T7 212 aa18.7■□□□□ 0.58
SSH1-207ENST00000547862 TEX10Q9NXF1 929 aaPredicted RBP18.7■□□□□ 0.58
SSH1-207ENST00000547862 C2orf92A0A1B0GVN3 265 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 OR6C76A6NM76 312 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 FAM47E-STBD1D6RA91 191 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 C2P06681 752 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 PTX3P26022 381 aaPredicted RBP18.69■□□□□ 0.58
SSH1-207ENST00000547862 KIR2DL3P43628 341 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 ALDH18A1P54886 795 aaKnown RBP18.69■□□□□ 0.58
SSH1-207ENST00000547862 DUSP8Q13202 625 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 BIKQ13323 160 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 RPS6KA2Q15349 733 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 NNATQ16517 81 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 NTRK2Q16620 822 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 C6orf163Q5TEZ5 329 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 TMEM198Q66K66 360 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 OR52E8Q6IFG1 317 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 MRM1Q6IN84 353 aaKnown RBP18.69■□□□□ 0.58
SSH1-207ENST00000547862 ZDHHC24Q6UX98 284 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 NAXEQ8NCW5 288 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 RILPQ96NA2 401 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 VPS11Q9H270 941 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 LIME1Q9H400 295 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 IPPKQ9H8X2 491 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 CCM2LQ9NUG4 571 aaPredicted RBP18.69■□□□□ 0.58
SSH1-207ENST00000547862 CRIM1Q9NZV1 1036 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 CAMK2AQ9UQM7 478 aa18.69■□□□□ 0.58
SSH1-207ENST00000547862 A0A096LPK6 155 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 ESYT3A0FGR9 886 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 H0YIV9 168 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 KRT38O76015 456 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 CT62P0C5K7 136 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 NT5EP21589 574 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 PIK3R1P27986 724 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 CAV1Q03135 178 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 PCDH1Q08174 1060 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 ACSF3Q4G176 576 aaPredicted RBP18.68■□□□□ 0.58
SSH1-207ENST00000547862 KLC3Q6P597 504 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 SEM1Q6ZVN7 128 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 GALNT12Q8IXK2 581 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 TNIP2Q8NFZ5 429 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 RHEBL1Q8TAI7 183 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 ATP6V1E2Q96A05 226 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 DDX31Q9H8H2 851 aaKnown RBP18.68■□□□□ 0.58
SSH1-207ENST00000547862 QPCTLQ9NXS2 382 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 SLC6A5Q9Y345 797 aa18.68■□□□□ 0.58
SSH1-207ENST00000547862 HRNRQ86YZ3 2850 aaPredicted RBP18.67■□□□□ 0.58
SSH1-207ENST00000547862 HSPB2A8KAH6 182 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 TP53I11O14683 189 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 PGRMC2O15173 223 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 SERPINB8P50452 374 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 CUL3Q13618 768 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 CEBPEQ15744 281 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 HSPB2Q16082 182 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 TTC19Q6DKK2 380 aaPredicted RBP18.67■□□□□ 0.58
SSH1-207ENST00000547862 PTGR2Q8N8N7 351 aaPredicted RBP18.67■□□□□ 0.58
SSH1-207ENST00000547862 WDR20Q8TBZ3 569 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 CLEC4MQ9H2X3 399 aaPredicted RBP18.67■□□□□ 0.58
SSH1-207ENST00000547862 NOL11Q9H8H0 719 aaKnown RBP18.67■□□□□ 0.58
SSH1-207ENST00000547862 CXorf21Q9HAI6 301 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 ACKR4Q9NPB9 350 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 PLEKHA6Q9Y2H5 1048 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 TSC22D4Q9Y3Q8 395 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 ITPR3Q14573 2671 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 DOCK7Q96N67 2140 aa18.67■□□□□ 0.58
SSH1-207ENST00000547862 ANKHD1Q8IWZ3 2542 aaKnown RBP18.66■□□□□ 0.58
SSH1-207ENST00000547862 CAPN14A8MX76 684 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 DVL2O14641 736 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 GNB5O14775 395 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 UGDHO60701 494 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 TRIM3O75382 744 aaPredicted RBP18.66■□□□□ 0.58
SSH1-207ENST00000547862 CTAG2O75638 210 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 ACSL3O95573 720 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 SLC35E2P0CK97 266 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 KRT15P19012 456 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 ASCL1P50553 236 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 CCNG1P51959 295 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 SLC7A5Q01650 507 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 CRYZQ08257 329 aaKnown RBP18.66■□□□□ 0.58
SSH1-207ENST00000547862 ACAP2Q15057 778 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 PCBP2Q15366 365 aaKnown RBP eCLIP18.66■□□□□ 0.581e-6■■■■■ 27.4
SSH1-207ENST00000547862 SGO1Q5FBB7 561 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 TECRLQ5HYJ1 363 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 TBCELQ5QJ74 424 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 UBAP2Q5T6F2 1119 aaKnown RBP18.66■□□□□ 0.58
SSH1-207ENST00000547862 FBXW10Q5XX13 1052 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 C17orf53Q8N3J3 647 aaPredicted RBP18.66■□□□□ 0.58
SSH1-207ENST00000547862 ZNF441Q8N8Z8 693 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 OR52B6Q8NGF0 335 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 SPPL2AQ8TCT8 520 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 PHF21BQ96EK2 531 aa18.66■□□□□ 0.58
SSH1-207ENST00000547862 RMND5BQ96G75 393 aaPredicted RBP18.66■□□□□ 0.58
SSH1-207ENST00000547862 ZNF358Q9NW07 568 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms