RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, human

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-208	ENST00000547148	HOXB9	P17482	250 aa	Predicted RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	MMP11	P24347	488 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	PTPN6	P29350	595 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	GALNS	P34059	522 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	MPI	P34949	423 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	CDK9	P50750	372 aa	Known RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	HBA1	P69905	142 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	HSPB3	Q12988	150 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	SRSF6	Q13247	344 aa	Known RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	BIK	Q13323	160 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	GAB1	Q13480	694 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	CYLC2	Q14093	348 aa	Predicted RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	ELAVL1	Q15717	326 aa	Known RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	LTB4R	Q15722	352 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	SPRED3	Q2MJR0	410 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	PAGE3	Q5JUK9	113 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	REP15	Q6BDI9	236 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	FAAH2	Q6GMR7	532 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	DPP10	Q8N608	796 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	C7orf57	Q8NEG2	295 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	ZFP28	Q8NHY6	868 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	ZNF675	Q8TD23	568 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	ADAMTS17	Q8TE56	1095 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	METTL21A	Q8WXB1	218 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	GTF2H4	Q92759	462 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	DGAT2	Q96PD7	388 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	WDR77	Q9BQA1	342 aa	Predicted RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	PELO	Q9BRX2	385 aa	Known RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	INPP5K	Q9BT40	448 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	RMND5A	Q9H871	391 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	CXorf21	Q9HAI6	301 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	NEUROD4	Q9HD90	331 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	ADAP2	Q9NPF8	381 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	MAT2B	Q9NZL9	334 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	LEF1	Q9UJU2	399 aa	Predicted RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	IGSF10	Q6WRI0	2623 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	DMXL2	Q8TDJ6	3036 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	IGHV3-20	A0A0C4DH32	117 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	CCT8L1P	A6NM43	557 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	C17orf105	B2RV13	164 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	SLITRK5	O94991	958 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	IFI6	P09912	130 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	CT62	P0C5K7	136 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	COX6A1	P12074	109 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	NT5E	P21589	574 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	MC3R	P41968	323 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	CDKN2C	P42773	168 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	MANF	P55145	182 aa	Known RBP	11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	MRPS35	P82673	323 aa	Known RBP	11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	EEF1A2	Q05639	463 aa	Known RBP	11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	LRRC74A	Q0VAA2	488 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	C19orf57	Q0VDD7	668 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	SSPN	Q14714	243 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	MAPKAPK3	Q16644	382 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	PRICKLE4	Q2TBC4	344 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	SFT2D3	Q587I9	215 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	LRIF1	Q5T3J3	769 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	KIRREL2	Q6UWL6	708 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	TMEM107	Q6UX40	140 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	GALNT12	Q8IXK2	581 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	ZNF248	Q8NDW4	579 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	VPS37A	Q8NEZ2	397 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	ADCY4	Q8NFM4	1077 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	KCNE4	Q8WWG9	221 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	RIT1	Q92963	219 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	C8orf44	Q96CB5	159 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	CTHRC1	Q96CG8	243 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	RCN3	Q96D15	328 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	CMTM5	Q96DZ9	223 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	RBM18	Q96H35	190 aa	Known RBP	11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	ITCH	Q96J02	903 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	CXorf36	Q9H7Y0	433 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	SLC6A13	Q9NSD5	602 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	TAS2R9	Q9NYW1	312 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	SLAMF8	Q9P0V8	285 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	MAP10	Q9P2G4	905 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	TAGLN3	Q9UI15	199 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148	NAV2	Q8IVL1	2488 aa		11.13	□□□□□ -0.63
PFKM-208	ENST00000547148		A0A096LPI6	279 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	TRBV5-3	A0A0A0MS03	114 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	SAGE2P	A6NJ88	616 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	FXYD1	O00168	92 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	HRK	O00198	91 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	PLOD2	O00469	737 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	RFXANK	O14593	260 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	MRAS	O14807	208 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	CREG1	O75629	220 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	UBOX5	O94941	541 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	CPSF4	O95639	269 aa	Known RBP	11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	DDAH2	O95865	285 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	CLPS	P04118	112 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	IFNA16	P05015	189 aa		11.12	□□□□□ -0.63
PFKM-208	ENST00000547148	GSN	P06396	782 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms