RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 GMFGO60234 142 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 FGF17O60258 216 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 GDF9O60383 454 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 UBE2IP63279 158 aaKnown RBP11.26□□□□□ -0.61
CCDC38-202ENST00000546386 PPP2R2BQ00005 443 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 OCA2Q04671 838 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 ZNF33BQ06732 778 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 EXOC3L2Q2M3D2 409 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 CMPK2Q5EBM0 449 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 LAIR1Q6GTX8 287 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 SLC5A8Q8N695 610 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 RCBTB1Q8NDN9 531 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 GPR32P1Q8NGA4 272 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 ZFP28Q8NHY6 868 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.26□□□□□ -0.61
CCDC38-202ENST00000546386 STARD8Q92502 1023 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 PEX11GQ96HA9 241 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 REEP1Q9H902 201 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 DDX18Q9NVP1 670 aaKnown RBP11.26□□□□□ -0.61
CCDC38-202ENST00000546386 PCOLCE2Q9UKZ9 415 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 TMEM184BQ9Y519 407 aaPredicted RBP11.26□□□□□ -0.61
CCDC38-202ENST00000546386 AHCTF1Q8WYP5 2266 aa11.26□□□□□ -0.61
CCDC38-202ENST00000546386 FFAR1O14842 300 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 SEMA3DO95025 777 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 RECKO95980 971 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 STXBP1P61764 594 aaKnown RBP11.25□□□□□ -0.61
CCDC38-202ENST00000546386 BTG2P78543 158 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 RGS1Q08116 209 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 FUT5Q11128 374 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 IQCCQ4KMZ1 466 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 LIN52Q52LA3 116 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 SLC48A1Q6P1K1 146 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 VRK2Q86Y07 508 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 TMEM126BQ8IUX1 230 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 OR5P2Q8WZ92 322 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 BATF3Q9NR55 127 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 DHCR7Q9UBM7 475 aaKnown RBP11.25□□□□□ -0.61
CCDC38-202ENST00000546386 SEC14L3Q9UDX4 400 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 IL20RAQ9UHF4 553 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 ENTPD4Q9Y227 616 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 GPR55Q9Y2T6 319 aaPredicted RBP11.25□□□□□ -0.61
CCDC38-202ENST00000546386 SPENQ96T58 3664 aaKnown RBP11.25□□□□□ -0.61
CCDC38-202ENST00000546386 MED12Q93074 2177 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 LOC100130705A0A1B0GUX0 176 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 PATE3B3GLJ2 98 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 H3BNH8 94 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 TNFRSF11BO00300 401 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 FESP07332 822 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 CHRM4P08173 479 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 TFPTP0C1Z6 253 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 NR2F6P10588 404 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 CD27P26842 260 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 NTSP30990 170 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 CXCL12P48061 93 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 IDH2P48735 452 aaKnown RBP11.25□□□□□ -0.61
CCDC38-202ENST00000546386 NUDT6P53370 316 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 TXNL4AP83876 142 aaKnown RBP11.25□□□□□ -0.61
CCDC38-202ENST00000546386 CHRNEQ04844 493 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 EEF1A2Q05639 463 aaKnown RBP11.25□□□□□ -0.61
CCDC38-202ENST00000546386 ADPRMQ3LIE5 342 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 MLIPQ5VWP3 458 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 ZNF614Q8N883 585 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 PJA1Q8NG27 643 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 DNAJA3Q96EY1 480 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 SLC35G5Q96KT7 338 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 NAA50Q9GZZ1 169 aaKnown RBP11.25□□□□□ -0.61
CCDC38-202ENST00000546386 RPS6KA6Q9UK32 745 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 ATXN7L1Q9ULK2 861 aaPredicted RBP11.25□□□□□ -0.61
CCDC38-202ENST00000546386 ZNF780BQ9Y6R6 833 aa11.25□□□□□ -0.61
CCDC38-202ENST00000546386 ZFHX2Q9C0A1 2572 aaPredicted RBP11.25□□□□□ -0.61
CCDC38-202ENST00000546386 TRBV4-1A0A0J9YWV2 114 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 OR5K3A6NET4 321 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 A8MUA0 341 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 ZNF217O75362 1048 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 CT62P0C5K7 136 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 MAOAP21397 527 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 NT5EP21589 574 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 PCGF2P35227 344 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 AHRP35869 848 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 OR1D4P47884 311 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 AVPR1BP47901 424 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 RPS15AP62244 130 aaKnown RBP11.24□□□□□ -0.61
CCDC38-202ENST00000546386 ABATP80404 500 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 MLLT1Q03111 559 aaPredicted RBP11.24□□□□□ -0.61
CCDC38-202ENST00000546386 CD47Q08722 323 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 KIR2DS3Q14952 304 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 MFSD4BQ5TF39 518 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 FAM69BQ5VUD6 431 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 SAXO2Q658L1 398 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 REEP3Q6NUK4 255 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 FIGNL1Q6PIW4 674 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 BCDIN3DQ7Z5W3 292 aaKnown RBP11.24□□□□□ -0.61
CCDC38-202ENST00000546386 NUP43Q8NFH3 380 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 GOT1L1Q8NHS2 421 aaPredicted RBP11.24□□□□□ -0.61
CCDC38-202ENST00000546386 BAHD1Q8TBE0 780 aaPredicted RBP11.24□□□□□ -0.61
CCDC38-202ENST00000546386 ATOH1Q92858 354 aaPredicted RBP11.24□□□□□ -0.61
CCDC38-202ENST00000546386 CDS1Q92903 461 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 TBC1D20Q96BZ9 403 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 QRFPRQ96P65 431 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms