RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 C16orf62Q7Z3J2 963 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 OR7G1Q8NGA0 311 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 C11orf24Q96F05 449 aaPredicted RBP13.92□□□□□ -0.18
HOXC11-202ENST00000546378 MCOLN1Q9GZU1 580 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 RHBGQ9H310 441 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 EVA1BQ9NVM1 165 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 GMFGO60234 142 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 NOS1APO75052 506 aaPredicted RBP13.92□□□□□ -0.18
HOXC11-202ENST00000546378 GATBO75879 557 aaKnown RBP13.92□□□□□ -0.18
HOXC11-202ENST00000546378 C8AP07357 584 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 DSTNP60981 165 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 SLC3A1Q07837 685 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 CAMK1Q14012 370 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 RAET1GQ6H3X3 334 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 ACSM5Q6NUN0 579 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 OR51G2Q8NGK0 314 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 ASB11Q8WXH4 323 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 FCGR1BQ92637 280 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 TADA1Q96BN2 335 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 RNFT2Q96EX2 444 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 DPCDQ9BVM2 203 aaPredicted RBP13.92□□□□□ -0.18
HOXC11-202ENST00000546378 HCFC1R1Q9NWW0 138 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 INSL5Q9Y5Q6 135 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 CFAP54Q96N23 3096 aa13.92□□□□□ -0.18
HOXC11-202ENST00000546378 K7ESM1 405 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 SLC2A10O95528 541 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 HMGA1P17096 107 aaKnown RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 E2F2Q14209 437 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 LARS2Q15031 903 aaKnown RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 PRSS53Q2L4Q9 553 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 CCDC149Q6ZUS6 474 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 VN1R5Q7Z5H4 357 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 ADGRD2Q7Z7M1 963 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 KLBQ86Z14 1044 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 GANCQ8TET4 914 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 EFHD2Q96C19 240 aaPredicted RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 AP2M1Q96CW1 435 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 PDLIM5Q96HC4 596 aaKnown RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 ZNF334Q9HCZ1 680 aaPredicted RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 SLAMF7Q9NQ25 335 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 TXNL4BQ9NX01 149 aaKnown RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 TAC3Q9UHF0 121 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 LSM7Q9UK45 103 aaKnown RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 FBXW2Q9UKT8 454 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 LAMA1P25391 3075 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 A0A0X1KG70 313 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 EEF1E1O43324 174 aaKnown RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 LEFTY1O75610 366 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 REM1O75628 298 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 GYPBP06028 91 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 EPHX1P07099 455 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 NR2F6P10588 404 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 ACVR1BP36896 505 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 ID2Q02363 134 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 SPATS1Q496A3 300 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 MED27Q6P2C8 311 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 ARL9Q6T311 187 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 FAM46DQ8NEK8 389 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 SLC7A6Q92536 515 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 TMEM80Q96HE8 168 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 CXorf36Q9H7Y0 433 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 RNF121Q9H920 327 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 ANGPT4Q9Y264 503 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 NAALAD2Q9Y3Q0 740 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 BACE2Q9Y5Z0 518 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 A0A1W2PS29 197 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 FAM172BPA6NC97 362 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 POU3F3P20264 500 aaPredicted RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 MAGEA2P43356 314 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 MAPK12P53778 367 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 SNRPD1P62314 119 aaKnown RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 KRR1Q13601 381 aaKnown RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 WDR45BQ5MNZ6 344 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 PEX13Q92968 403 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 SIPA1Q96FS4 1042 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 FAM120CQ9NX05 1096 aaKnown RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 TMPRSS11EQ9UL52 423 aa13.91□□□□□ -0.18
HOXC11-202ENST00000546378 PPIEQ9UNP9 301 aaKnown RBP13.91□□□□□ -0.18
HOXC11-202ENST00000546378 B4DXG7 233 aa13.9□□□□□ -0.18
HOXC11-202ENST00000546378 WASH3PC4AMC7 463 aa13.9□□□□□ -0.18
HOXC11-202ENST00000546378 KIAA0355O15063 1070 aa13.9□□□□□ -0.18
HOXC11-202ENST00000546378 SCN2BO60939 215 aa13.9□□□□□ -0.18
HOXC11-202ENST00000546378 ZNF8P17098 575 aaPredicted RBP13.9□□□□□ -0.18
HOXC11-202ENST00000546378 OC90Q02509 493 aaPredicted RBP13.9□□□□□ -0.18
HOXC11-202ENST00000546378 CAMK2BQ13554 666 aa13.9□□□□□ -0.18
HOXC11-202ENST00000546378 LCN1P1Q5VSP4 162 aa13.9□□□□□ -0.18
HOXC11-202ENST00000546378 FAM109BQ6ICB4 259 aaPredicted RBP13.9□□□□□ -0.18
HOXC11-202ENST00000546378 FAHD1Q6P587 224 aa13.9□□□□□ -0.18
HOXC11-202ENST00000546378 BOLLQ8N9W6 283 aaKnown RBP13.9□□□□□ -0.18
HOXC11-202ENST00000546378 KREMEN2Q8NCW0 462 aa13.9□□□□□ -0.18
HOXC11-202ENST00000546378 SLC7A13Q8TCU3 470 aa13.9□□□□□ -0.18
HOXC11-202ENST00000546378 PMEPA1Q969W9 287 aa13.9□□□□□ -0.18
HOXC11-202ENST00000546378 FAM46AQ96IP4 442 aaKnown RBP13.9□□□□□ -0.18
HOXC11-202ENST00000546378 SPRTNQ9H040 489 aaPredicted RBP13.9□□□□□ -0.18
HOXC11-202ENST00000546378 ZCCHC3Q9NUD5 404 aaKnown RBP13.9□□□□□ -0.18
HOXC11-202ENST00000546378 INSL6Q9Y581 213 aa13.9□□□□□ -0.18
HOXC11-202ENST00000546378 A0A0B4J293 547 aa13.9□□□□□ -0.18
HOXC11-202ENST00000546378 ANKRD36A6QL64 1941 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms