RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PGRMC2O15173 223 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 WDR1O75083 606 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 PRKRAO75569 313 aaKnown RBP8.63□□□□□ -1.03
YBX3-218ENST00000546298 KRT6AP02538 564 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 GBAP04062 536 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 KRT6BP04259 564 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 HSD3B1P14060 373 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 CPMP14384 443 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 PORP16435 677 aaPredicted RBP8.63□□□□□ -1.03
YBX3-218ENST00000546298 KRT15P19012 456 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 NT5EP21589 574 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 HSD3B2P26439 372 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 ACVR2AP27037 513 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 ECHS1P30084 290 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 PIGAP37287 484 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 MAGEA5P43359 124 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 KIR3DL1P43629 444 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 KRT6CP48668 564 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 CDH13P55290 713 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 TRA2BP62995 288 aaKnown RBP8.63□□□□□ -1.03
YBX3-218ENST00000546298 FUT7Q11130 342 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 EBPQ15125 230 aaKnown RBP8.63□□□□□ -1.03
YBX3-218ENST00000546298 UBAP2Q5T6F2 1119 aaKnown RBP8.63□□□□□ -1.03
YBX3-218ENST00000546298 WLSQ5T9L3 541 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 TMEM198Q66K66 360 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 ZNF585AQ6P3V2 769 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 LYPD8Q6UX82 237 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 FBXW8Q8N3Y1 598 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 DOK4Q8TEW6 326 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 ZNF483Q8TF39 744 aaPredicted RBP8.63□□□□□ -1.03
YBX3-218ENST00000546298 CHTF18Q8WVB6 975 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 NSUN5Q96P11 429 aaKnown RBP8.63□□□□□ -1.03
YBX3-218ENST00000546298 SECISBP2Q96T21 854 aaKnown RBP8.63□□□□□ -1.03
YBX3-218ENST00000546298 DOHHQ9BU89 302 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 FAIM2Q9BWQ8 316 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 C1QTNF3Q9BXJ4 246 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 MRPL1Q9BYD6 325 aaKnown RBP8.63□□□□□ -1.03
YBX3-218ENST00000546298 ENKD1Q9H0I2 346 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 BRF2Q9HAW0 419 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 SH2D2AQ9NP31 389 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 KCNJ16Q9NPI9 418 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 TRPS1Q9UHF7 1281 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 NFU1Q9UMS0 254 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 RNF6Q9Y252 685 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 CFL2Q9Y281 166 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 STK38LQ9Y2H1 464 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 PCDHA9Q9Y5H5 950 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 HRH3Q9Y5N1 445 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 CPAMD8Q8IZJ3 1885 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 CACNA1DQ01668 2161 aa8.63□□□□□ -1.03
YBX3-218ENST00000546298 TRGV5A0A0B4J1U4 118 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 FOXO6A8MYZ6 492 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 C19orf84I3L1E1 186 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 CDH16O75309 829 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 ULK1O75385 1050 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 SUPT7LO94864 414 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 SNX4O95219 450 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 GABRA1P14867 456 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 NAGAP17050 411 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 CSNK2A2P19784 350 aaPredicted RBP8.62□□□□□ -1.03
YBX3-218ENST00000546298 CAPN3P20807 821 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 ATP5F1P24539 256 aaPredicted RBP8.62□□□□□ -1.03
YBX3-218ENST00000546298 ELAVL4P26378 380 aaKnown RBP8.62□□□□□ -1.03
YBX3-218ENST00000546298 SSTR4P31391 388 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 HSD17B3P37058 310 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 NR0B1P51843 470 aaKnown RBP8.62□□□□□ -1.03
YBX3-218ENST00000546298 CLCQ05315 142 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 PMPCAQ10713 525 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 RASA2Q15283 850 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 RPS6KA2Q15349 733 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 CDSNQ15517 529 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 NTRK2Q16620 822 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 EMC4Q5J8M3 183 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 PRAMEF20Q5VT98 475 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 SLC48A1Q6P1K1 146 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 ADGRD1Q6QNK2 874 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 B3GNT6Q6ZMB0 384 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 MEX3BQ6ZN04 569 aaKnown RBP8.62□□□□□ -1.03
YBX3-218ENST00000546298 COMMD6Q7Z4G1 85 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 SLC22A9Q8IVM8 553 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 LRRC25Q8N386 305 aaPredicted RBP8.62□□□□□ -1.03
YBX3-218ENST00000546298 LIX1Q8N485 282 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 MARVELD2Q8N4S9 558 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 ZNF441Q8N8Z8 693 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 C17orf47Q8NEP4 570 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 OR10G3Q8NGC4 313 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 OR5M9Q8NGP3 310 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 OR10Q1Q8NGQ4 319 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 ACMSDQ8TDX5 336 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 DIO2Q92813 273 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 C14orf79Q96F83 325 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 JSRP1Q96MG2 331 aaPredicted RBP8.62□□□□□ -1.03
YBX3-218ENST00000546298 TRIM8Q9BZR9 551 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 OR10A5Q9H207 317 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 SLC24A3Q9HC58 644 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 ACKR4Q9NPB9 350 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 PNPLA3Q9NST1 481 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 TEX10Q9NXF1 929 aaPredicted RBP8.62□□□□□ -1.03
YBX3-218ENST00000546298 ALKBH4Q9NXW9 302 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 NPFFR2Q9Y5X5 522 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms