RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ARHGAP15Q53QZ3 475 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 OR2G6Q5TZ20 316 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 C22orf42Q6IC83 251 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 LCTLQ6UWM7 567 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 USP30Q70CQ3 517 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 OR8J1Q8NGP2 316 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 LRR1Q96L50 414 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 YIPF2Q9BWQ6 316 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 MND1Q9BWT6 205 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 QRSL1Q9H0R6 528 aaKnown RBP14.95□□□□□ -0.02
LDLR-204ENST00000545707 MMP28Q9H239 520 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 OR51I1Q9H343 314 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 TBC1D14Q9P2M4 693 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 RPL36Q9Y3U8 105 aaKnown RBP14.95□□□□□ -0.02
LDLR-204ENST00000545707 MN1Q10571 1320 aaPredicted RBP14.95□□□□□ -0.02
LDLR-204ENST00000545707 NOTCH4Q99466 2003 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 MYL12BO14950 172 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 CAPN5O15484 640 aaPredicted RBP14.95□□□□□ -0.02
LDLR-204ENST00000545707 OR1F1O43749 312 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 UGT2B17O75795 530 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 KRR1Q13601 381 aaKnown RBP14.95□□□□□ -0.02
LDLR-204ENST00000545707 GINS1Q14691 196 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 ZNF750Q32MQ0 723 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 ATAT1Q5SQI0 421 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 ARMC4Q5T2S8 1044 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 SHFQ7M4L6 423 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 ADCK2Q7Z695 626 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 IQCHQ86VS3 1027 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 SLC30A8Q8IWU4 369 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 OR52I1Q8NGK6 324 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 LRIG1Q96JA1 1093 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 CCDC32Q9BV29 185 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 LGR4Q9BXB1 951 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 ABCB9Q9NP78 766 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 PAK6Q9NQU5 681 aaPredicted RBP14.95□□□□□ -0.02
LDLR-204ENST00000545707 ITGB1BP2Q9UKP3 347 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 STUB1Q9UNE7 303 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 GPR52Q9Y2T5 361 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 N6AMT1Q9Y5N5 214 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 A0A1W2PQ09 198 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 ZNF670-ZNF695F2Z2N8 137 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 KRT8P05787 483 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 EPHX1P07099 455 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 NR2F1P10589 423 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 SSTR4P31391 388 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 CAV3P56539 151 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 FNDC3BQ53EP0 1204 aaKnown RBP14.94□□□□□ -0.02
LDLR-204ENST00000545707 TMEM201Q5SNT2 666 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 ATAD3CQ5T2N8 411 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 MEDAGQ5VYS4 303 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 UBE3DQ7Z6J8 389 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 KRT73Q86Y46 540 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 UBQLNLQ8IYU4 475 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 SYT14Q8NB59 555 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 FLCNQ8NFG4 579 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 OR4K5Q8NGD3 323 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 OR6T1Q8NGN1 323 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 OR6F1Q8NGZ6 308 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 PLA2G12AQ9BZM1 189 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 DPEP2Q9H4A9 486 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 C3orf14Q9HBI5 128 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 DDX28Q9NUL7 540 aaKnown RBP14.94□□□□□ -0.02
LDLR-204ENST00000545707 NDUFB11Q9NX14 153 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 SEC14L4Q9UDX3 406 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 SSR3Q9UNL2 185 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 TCF20Q9UGU0 1960 aaKnown RBP14.94□□□□□ -0.02
LDLR-204ENST00000545707 HYKKA2RU49 373 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 LATO43561 262 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 SEMA3DO95025 777 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 EPPINO95925 133 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 LINC00271P0C7V0 271 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 ADRB3P13945 408 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 KELP23276 732 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 GPC1P35052 558 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 PSPHP78330 225 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 HNRNPA0Q13151 305 aaKnown RBP14.94□□□□□ -0.02
LDLR-204ENST00000545707 LARS2Q15031 903 aaKnown RBP14.94□□□□□ -0.02
LDLR-204ENST00000545707 GPR19Q15760 415 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 SYT14P1Q58G82 188 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 C9orf64Q5T6V5 341 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 ZNF607Q96SK3 696 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 C17orf62Q9BQA9 187 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 FUZQ9BT04 418 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 GLIPR2Q9H4G4 154 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 EGLN3Q9H6Z9 239 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 TXNL4BQ9NX01 149 aaKnown RBP14.94□□□□□ -0.02
LDLR-204ENST00000545707 NDOR1Q9UHB4 597 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 HCN2Q9UL51 889 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 BOLA1Q9Y3E2 137 aa14.94□□□□□ -0.02
LDLR-204ENST00000545707 SPIN1Q9Y657 262 aaPredicted RBP14.94□□□□□ -0.02
LDLR-204ENST00000545707 MTCL1Q9Y4B5 1905 aaKnown RBP14.94□□□□□ -0.02
LDLR-204ENST00000545707 A0A1W2PS29 197 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 OTOL1A6NHN0 477 aaPredicted RBP14.93□□□□□ -0.02
LDLR-204ENST00000545707 FRS3O43559 492 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 PRNPP04156 253 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 IL7P13232 177 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 CEBPBP17676 345 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 VIPR2P41587 438 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 GIPRP48546 466 aa14.93□□□□□ -0.02
LDLR-204ENST00000545707 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms