RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 IGFBP1P08833 259 aaPredicted RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 SLC2A2P11168 524 aaPredicted RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 GSTM3P21266 225 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 ETV3P41162 512 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 RECQLP46063 649 aaPredicted RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 DGKEP52429 567 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 SMSP52788 366 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 GAS1P54826 345 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 RAB25P57735 213 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 CDK5Q00535 292 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 TATDN3Q17R31 274 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 CCDC58Q4VC31 144 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 Q5BKY6 102 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 DEF8Q6ZN54 512 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 Q6ZVU0 165 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 ZNF767PQ75MW2 155 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 UTS2BQ765I0 119 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 DPPA4Q7L190 304 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 WDR53Q7Z5U6 358 aaPredicted RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 SLC9B2Q86UD5 537 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 CAMKK1Q8N5S9 505 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 ZNF557Q8N988 423 aaPredicted RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 C19orf18Q8NEA5 215 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 ATP6V1C2Q8NEY4 427 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 OR9A1PQ8NGU1 263 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 SLC7A13Q8TCU3 470 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 SETD7Q8WTS6 366 aaKnown RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 GTPBP2Q9BX10 602 aaKnown RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 STARD7Q9NQZ5 370 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 TVP23BQ9NYZ1 205 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 A4GNTQ9UNA3 340 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 MYO10Q9HD67 2058 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 TRDV1A0A1B0GX56 115 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 OR6C70A6NIJ9 312 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 SGK494L7N484 410 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 SAP18O00422 153 aaKnown RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 PDPK1O15530 556 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 ZNF780AO75290 641 aaPredicted RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 SLC43A1O75387 559 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 CLEC2LP0C7M8 214 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 OPRD1P41143 372 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 FRKP42685 505 aaPredicted RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 CLDN20P56880 219 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 UBE3AQ05086 875 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 TMEM115Q12893 351 aaPredicted RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 MINDY4Q4G0A6 757 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 FLYWCH1Q4VC44 716 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 ENTPD8Q5MY95 495 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 TNFAIP8L2Q6P589 184 aaPredicted RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 SLC36A4Q6YBV0 504 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 TECPR1Q7Z6L1 1165 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 MRGPREQ86SM8 312 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 NRSN1Q8IZ57 195 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 CMTM8Q8IZV2 173 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 LILRA3Q8N6C8 439 aaPredicted RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 YIPF7Q8N8F6 280 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 OR2A12Q8NGT7 310 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 LRR1Q96L50 414 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 PPP1R3EQ9H7J1 279 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 ING3Q9NXR8 418 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 SEC14L3Q9UDX4 400 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 ADAM30Q9UKF2 790 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 NDRG2Q9UN36 371 aaKnown RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 DENND4AQ7Z401 1863 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 TRAV19A0A0A6YYK7 116 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 ANKDD1BA6NHY2 528 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 ERVH48-1M5A8F1 160 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 HMGN4O00479 90 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 FAM157BP0CG42 384 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 ELNP15502 786 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 TNNI3P19429 210 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 GABRR2P28476 465 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 PDHA2P29803 388 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 GIPRP48546 466 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 RPS25P62851 125 aaKnown RBP8.28□□□□□ -1.08
TDP1-204ENST00000545686 CYP4F8P98187 520 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 HOXC5Q00444 222 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 TAP2Q03519 686 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 GINS1Q14691 196 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 SF3A2Q15428 464 aaKnown RBP8.28□□□□□ -1.08
TDP1-204ENST00000545686 TMEM44Q2T9K0 475 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 C1orf94Q6P1W5 598 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 PODNL1Q6PEZ8 512 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 TMEM220Q6QAJ8 160 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 TMIGD1Q6UXZ0 262 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 CREB3L2Q70SY1 520 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 PDZD3Q86UT5 571 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 KRT78Q8N1N4 520 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 Q8N402 240 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 OR52P1PQ8NH57 321 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 ZNF689Q96CS4 500 aaPredicted RBP8.28□□□□□ -1.08
TDP1-204ENST00000545686 CHFRQ96EP1 664 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 MARVELD1Q9BSK0 173 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 PRRG3Q9BZD7 231 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 ZCCHC2Q9C0B9 1178 aaKnown RBP8.28□□□□□ -1.08
TDP1-204ENST00000545686 GIMAP4Q9NUV9 329 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 SPG21Q9NZD8 308 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 P2RX2Q9UBL9 471 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 ALG5Q9Y673 324 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 HEATR5BQ9P2D3 2071 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms