RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SPACA6W5XKT8 324 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 USF3Q68DE3 2245 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 RAI1Q7Z5J4 1906 aaPredicted RBP13.41□□□□□ -0.26
RTN3-214ENST00000545432 DSCAMO60469 2012 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 IQANK1A0A1B0GTG1 560 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 CAPN14A8MX76 684 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 MSTNO14793 375 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 CDH16O75309 829 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 LRATO95237 230 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 CYP4B1P13584 511 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 ALOX15P16050 662 aaPredicted RBP13.4□□□□□ -0.26
RTN3-214ENST00000545432 EPORP19235 508 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 CPN2P22792 545 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 CHMP24386 653 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 PTH2RP49190 550 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 PLIN5Q00G26 463 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 FUT7Q11130 342 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 CYP1B1Q16678 543 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 WIPI1Q5MNZ9 446 aaPredicted RBP13.4□□□□□ -0.26
RTN3-214ENST00000545432 RNASEH2BQ5TBB1 312 aaKnown RBP13.4□□□□□ -0.26
RTN3-214ENST00000545432 BICRALQ6AI39 1079 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 HEPHL1Q6MZM0 1159 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 ZNF662Q6ZS27 426 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 ADAMTSL2Q86TH1 951 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 PACS2Q86VP3 889 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 IGDCC3Q8IVU1 814 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 PPIL6Q8IXY8 311 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 PELOQ9BRX2 385 aaKnown RBP13.4□□□□□ -0.26
RTN3-214ENST00000545432 TMEM79Q9BSE2 394 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 RPF2Q9H7B2 306 aaKnown RBP13.4□□□□□ -0.26
RTN3-214ENST00000545432 SNX15Q9NRS6 342 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 C6orf203Q9P0P8 240 aaPredicted RBP13.4□□□□□ -0.26
RTN3-214ENST00000545432 SLC17A6Q9P2U8 582 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 PACSIN3Q9UKS6 424 aa13.4□□□□□ -0.26
RTN3-214ENST00000545432 ABCA1O95477 2261 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 NPEPPSL1A6NEC2 478 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 RTCAO00442 366 aaKnown RBP13.39□□□□□ -0.27
RTN3-214ENST00000545432 WISP3O95389 354 aaPredicted RBP13.39□□□□□ -0.27
RTN3-214ENST00000545432 CRHP06850 196 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 ARFIP1P53367 373 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 DIO3P55073 304 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 FBXW4P57775 412 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 HERVK_113P63132 956 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 ERVK-8P63133 956 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 FAM27E3Q08E93 113 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 LAPTM5Q13571 262 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 FRG1Q14331 258 aaKnown RBP13.39□□□□□ -0.27
RTN3-214ENST00000545432 TGFBIQ15582 683 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 TSNQ15631 228 aaKnown RBP13.39□□□□□ -0.27
RTN3-214ENST00000545432 DEPDC1Q5TB30 811 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 RNF111Q6ZNA4 994 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 TCAIMQ8N3R3 496 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 FAM83FQ8NEG4 500 aaPredicted RBP13.39□□□□□ -0.27
RTN3-214ENST00000545432 C17orf47Q8NEP4 570 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 ANKRD49Q8WVL7 239 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 ADIPOR1Q96A54 375 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 INTS12Q96CB8 462 aaKnown RBP13.39□□□□□ -0.27
RTN3-214ENST00000545432 PERPQ96FX8 193 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 VPS39Q96JC1 886 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 EGFL8Q99944 293 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 ERVK-6Q9BXR3 956 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 DNAJC11Q9NVH1 559 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 ERVK-19Q9WJR5 959 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 MED12LQ86YW9 2145 aa13.39□□□□□ -0.27
RTN3-214ENST00000545432 CUBNO60494 3623 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 LRRC14BA6NHZ5 514 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 CLGNO14967 610 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 HCRTR2O43614 444 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 GPR75O95800 540 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 NAGAP17050 411 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 CPA2P48052 419 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 GFRA1P56159 465 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 TAS2R39P59534 338 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 ZNF267Q14586 743 aaPredicted RBP13.38□□□□□ -0.27
RTN3-214ENST00000545432 AP5B1Q2VPB7 878 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 MSS51Q4VC12 460 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 OR4C11Q6IEV9 310 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 MRM1Q6IN84 353 aaKnown RBP13.38□□□□□ -0.27
RTN3-214ENST00000545432 SCIMPQ6UWF3 145 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 TMEM64Q6YI46 380 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 LAS2Q8IYD9 372 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 ZCCHC7Q8N3Z6 543 aaKnown RBP13.38□□□□□ -0.27
RTN3-214ENST00000545432 ZNF615Q8N8J6 731 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 STARD4Q96DR4 205 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 GAL3ST4Q96RP7 486 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 MCMBPQ9BTE3 642 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 OR2B2Q9GZK3 357 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 TEX10Q9NXF1 929 aaPredicted RBP13.38□□□□□ -0.27
RTN3-214ENST00000545432 ZNF226Q9NYT6 803 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 CTNNAL1Q9UBT7 734 aa13.38□□□□□ -0.27
RTN3-214ENST00000545432 C2orf92A0A1B0GVN3 265 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 A0A1W2PNV4 684 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 RNF212BA8MTL3 300 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 STK16O75716 305 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 ABCB1P08183 1280 aaPredicted RBP13.37□□□□□ -0.27
RTN3-214ENST00000545432 RHOXF2BP0C7M4 288 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 SLC35E2BP0CK96 405 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 SLC35E2P0CK97 266 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 CD79BP40259 229 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 PTGDSP41222 190 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms