RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 C5AR2Q9P296 337 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 GMPR2Q9P2T1 348 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 BTNL2Q9UIR0 455 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CES1P1Q9UKY3 287 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 BLOC1S6Q9UL45 172 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 PLCL2Q9UPR0 1127 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 WBP11Q9Y2W2 641 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ORC6Q9Y5N6 252 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 PTPRZ1P23471 2315 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 A0A1W2PNU3 283 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 GNG14A0A1W2PPG7 69 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 FAM149AA5PLN7 773 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ANKRD33BA6NCL7 494 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CCDC160A6NGH7 325 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 A8MU76 341 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CYR61O00622 381 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 PGRMC2O15173 223 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ZSCAN9O15535 394 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 PROM1O43490 865 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 DNAJB5O75953 348 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TIAF1O95411 115 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CST1P01037 141 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ALPLP05186 524 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 EIF2S1P05198 315 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ABCB1P08183 1280 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 THRBP10828 461 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 GPX2P18283 190 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 DDCP20711 480 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 MLLT3P42568 568 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 FRKP42685 505 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CDK9P50750 372 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 EFNA3P52797 238 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CLDN6P56747 220 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 STXBP1P61764 594 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 OLR1P78380 273 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 BTN3A2P78410 334 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 DAB2P98082 770 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 RGS1Q08116 209 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 SLAMF1Q13291 335 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 GAB1Q13480 694 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ELOAQ14241 798 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CLPPQ16740 277 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ZBED5Q49AG3 693 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CYBRD1Q53TN4 286 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 SNAP47Q5SQN1 464 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CDCP2Q5VXM1 449 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 OR4F3Q6IEY1 312 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 FAM180BQ6P0A1 224 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TRIM40Q6P9F5 258 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ASCL5Q7RTU5 278 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ZNF551Q7Z340 670 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 GPR141Q7Z602 305 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ERI1Q8IV48 349 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CLECL1Q8IZS7 167 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ZNF786Q8N393 782 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TBC1D19Q8N5T2 526 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 RHBDD1Q8TEB9 315 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CYGBQ8WWM9 190 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 PMEPA1Q969W9 287 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TMBIM1Q969X1 311 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 RERGQ96A58 199 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CIDECQ96AQ7 238 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 MTERF3Q96E29 417 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 NRBF2Q96F24 287 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 INPP5KQ9BT40 448 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ASPSCR1Q9BZE9 553 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 REEP4Q9H6H4 257 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 PDE7BQ9NP56 450 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ATAD3AQ9NVI7 634 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TAS2R7Q9NYW3 318 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 FTSJ1Q9UET6 329 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 RSL24D1Q9UHA3 163 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 BAG5Q9UL15 447 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 DAPP1Q9UN19 280 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 KNTC1P50748 2209 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 PMS2P1A4D2B8 440 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 TMEM150CB9EJG8 249 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 TGFBR3LH3BV60 316 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 PDLIM1O00151 329 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 CLIC1O00299 241 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 B4GALT2O60909 372 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 CDH2P19022 906 aaPredicted RBP6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 EFNA1P20827 205 aaPredicted RBP6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 HPCAL1P37235 193 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 GSTM5P46439 218 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 GZMMP51124 257 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 DUSP3P51452 185 aaPredicted RBP6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 EMP3P54852 163 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 LIM2P55344 173 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 PCBP4P57723 403 aaKnown RBP6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 NUP107P57740 925 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 TRA2BP62995 288 aaKnown RBP6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 TUBA3CQ13748 450 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 SELPLGQ14242 412 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 SUZ12Q15022 739 aaKnown RBP6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 CEBPEQ15744 281 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 PGS1Q32NB8 556 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 NDUFAF5Q5TEU4 345 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 CPZQ66K79 652 aa6.59□□□□□ -1.35
HMGCS2-204ENST00000544913 THAP5Q7Z6K1 395 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms