RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 OSTF1Q92882 214 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 SORBS1Q9BX66 1292 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 DPEP2Q9H4A9 486 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 RANBP3Q9H6Z4 567 aaPredicted RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 SFXN1Q9H9B4 322 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 ACOT13Q9NPJ3 140 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CD93Q9NPY3 652 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 FBXL12Q9NXK8 326 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 DNMT3BQ9UBC3 853 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 CLEC4EQ9ULY5 219 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 FUOMA2VDF0 154 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 GLOD5A6NK44 160 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 SLITRK5O94991 958 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 IL7P13232 177 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 SYN1P17600 705 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 NPR2P20594 1047 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 PRPH2P23942 346 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 PCSK6P29122 969 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 IMPA1P29218 277 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 PIGAP37287 484 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 HNRNPFP52597 415 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 LASP1Q14847 261 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 PTGES3Q15185 160 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 IDNKQ5T6J7 187 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 GTF2IRD2BQ6EKJ0 949 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 ZNF613Q6PF04 617 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 KLHL24Q6TFL4 600 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 ZNF765Q7L2R6 523 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 GTF2IRD2Q86UP8 949 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 OR10H4Q8NGA5 316 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 OR4E2Q8NGC2 313 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 ZNF480Q8WV37 535 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 TNFAIP8L1Q8WVP5 186 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 HERVK_113Q902F9 699 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 NKIRAS2Q9NYR9 191 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 UBQLN2Q9UHD9 624 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 HEPACAM2A8MVW5 462 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 FXYD1O00168 92 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 RTCAO00442 366 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 PRAMEF12O95522 483 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CRYZL1O95825 349 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CYP17A1P05093 508 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 FHP07954 510 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 PRKACBP22694 351 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 ACVR2AP27037 513 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 GTF2E2P29084 291 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 RBM34P42696 430 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 SLC6A12P48065 614 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 TAS2R38P59533 333 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CD83Q01151 205 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 RELAQ04206 551 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 GRSF1Q12849 480 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS50-220ENST00000544910 ILF3Q12906 894 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS50-220ENST00000544910 DSG2Q14126 1118 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 GINS1Q14691 196 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CYHR1Q6ZMK1 362 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 DCDC5Q6ZRR9 648 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 KIF18BQ86Y91 864 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CADM2Q8N3J6 435 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 NUP43Q8NFH3 380 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 OR4C6Q8NH72 309 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 FANK1Q8TC84 345 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 GPR151Q8TDV0 419 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 SMARCD2Q92925 531 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 TMED9Q9BVK6 235 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CUEDC1Q9NWM3 386 aaPredicted RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 SLC25A37Q9NYZ2 338 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 TNFRSF10DQ9UBN6 386 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 IFT52Q9Y366 437 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 PCDHGB1Q9Y5G3 927 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 DNMT3AQ9Y6K1 912 aaPredicted RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 DAPL1A0PJW8 107 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 CLDN24A6NM45 220 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 KDM4BO94953 1096 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 WISP3O95389 354 aaPredicted RBP5.5□□□□□ -1.53
VPS50-220ENST00000544910 NUDT14O95848 222 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 NUDT7P0C024 238 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 CKMT1AP12532 417 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 ZNF3P17036 446 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 IL1RNP18510 177 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 S100A2P29034 98 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 RAB8AP61006 207 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 NTHL1P78549 312 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 GPR68Q15743 365 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 BCL7AQ4VC05 210 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 HENMT1Q5T8I9 393 aaKnown RBP5.5□□□□□ -1.53
VPS50-220ENST00000544910 PIWIL3Q7Z3Z3 882 aaKnown RBP5.5□□□□□ -1.53
VPS50-220ENST00000544910 MARCH9Q86YJ5 346 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 TMC8Q8IU68 726 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 PLPP6Q8IY26 295 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 METTL4Q8N3J2 472 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 OR52E4Q8NGH9 312 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 ART5Q96L15 291 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 RIPOR3Q96MK2 946 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 CCDC32Q9BV29 185 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 DPAGT1Q9H3H5 408 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 CHMP1AQ9HD42 196 aaPredicted RBP5.5□□□□□ -1.53
VPS50-220ENST00000544910 NLGN3Q9NZ94 848 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 PADI2Q9Y2J8 665 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 PCDHGA2Q9Y5H1 932 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms