RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ERVK-19Q9WJR5 959 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 PCDHGA10Q9Y5H3 936 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 MYO1GB0I1T2 1018 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 DYRK3O43781 588 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 PEX11AO75192 247 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 ERAL1O75616 437 aaKnown RBP17.75■□□□□ 0.43
DDX55-211ENST00000544429 CD96P40200 585 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 PPP2R2AP63151 447 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 ARG2P78540 354 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 ZNF267Q14586 743 aaPredicted RBP17.75■□□□□ 0.43
DDX55-211ENST00000544429 PDCD2Q16342 344 aaPredicted RBP17.75■□□□□ 0.43
DDX55-211ENST00000544429 COLEC12Q5KU26 742 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 ZNF468Q5VIY5 522 aaPredicted RBP17.75■□□□□ 0.43
DDX55-211ENST00000544429 FAM180BQ6P0A1 224 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 ZNF227Q86WZ6 799 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 TICAM1Q8IUC6 712 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 LRRC25Q8N386 305 aaPredicted RBP17.75■□□□□ 0.43
DDX55-211ENST00000544429 ZNF615Q8N8J6 731 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 MDS2Q8NDY4 140 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 ZNF675Q8TD23 568 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 MEAF6Q9HAF1 191 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 PCDHGB6Q9Y5F9 930 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 ZNF780BQ9Y6R6 833 aa17.75■□□□□ 0.43
DDX55-211ENST00000544429 PRRC2CQ9Y520 2896 aaKnown RBP17.75■□□□□ 0.43
DDX55-211ENST00000544429 OR6C76A6NM76 312 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 GABRR3A8MPY1 467 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 ITGA10O75578 1167 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 SSTR4P31391 388 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 EMX2Q04743 252 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 ZNF169Q14929 603 aaPredicted RBP17.74■□□□□ 0.43
DDX55-211ENST00000544429 MPEG1Q2M385 716 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 ZNF628Q5EBL2 1059 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 RPUSD3Q6P087 351 aaKnown RBP17.74■□□□□ 0.43
DDX55-211ENST00000544429 OR7G1Q8NGA0 311 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 DOK4Q8TEW6 326 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 THAP3Q8WTV1 239 aaPredicted RBP17.74■□□□□ 0.43
DDX55-211ENST00000544429 EXOSC8Q96B26 276 aaKnown RBP17.74■□□□□ 0.43
DDX55-211ENST00000544429 TUBGCP3Q96CW5 907 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 BARD1Q99728 777 aaKnown RBP17.74■□□□□ 0.43
DDX55-211ENST00000544429 CNPPD1Q9BV87 410 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 AKTIPQ9H8T0 292 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.74■□□□□ 0.43
DDX55-211ENST00000544429 ABI3Q9P2A4 366 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 BAIAP2L1Q9UHR4 511 aa17.74■□□□□ 0.43
DDX55-211ENST00000544429 YARS2Q9Y2Z4 477 aaKnown RBP17.74■□□□□ 0.43
DDX55-211ENST00000544429 TRAV17A0A0B4J275 112 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 ZNF354AO60765 605 aaPredicted RBP17.73■□□□□ 0.43
DDX55-211ENST00000544429 NEURL1O76050 574 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 MAPK1P28482 360 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 FRKP42685 505 aaPredicted RBP17.73■□□□□ 0.43
DDX55-211ENST00000544429 ASMTP46597 345 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 HLCSP50747 726 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 C21orf58P58505 322 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 DUSP8Q13202 625 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 EBPQ15125 230 aaKnown RBP17.73■□□□□ 0.43
DDX55-211ENST00000544429 LTB4RQ15722 352 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 FAM111BQ6SJ93 734 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 RNF111Q6ZNA4 994 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 C16orf47Q6ZP98 133 aaPredicted RBP17.73■□□□□ 0.43
DDX55-211ENST00000544429 LARP4Q71RC2 724 aaKnown RBP eCLIP17.73■□□□□ 0.43
DDX55-211ENST00000544429 VWA5B2Q8N398 1253 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 ZNF441Q8N8Z8 693 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 OR5L2Q8NGL0 311 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 ERP27Q96DN0 273 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 MTERF3Q96E29 417 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 TSSK3Q96PN8 268 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 SIGLEC12Q96PQ1 595 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 NUF2Q9BZD4 464 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 ACBD3Q9H3P7 528 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 REEP4Q9H6H4 257 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 SLAMF7Q9NQ25 335 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 MIEF1Q9NQG6 463 aa17.73■□□□□ 0.43
DDX55-211ENST00000544429 RYDENQ9NUL5 291 aaKnown RBP17.73■□□□□ 0.43
DDX55-211ENST00000544429 HEMK1Q9Y5R4 338 aaPredicted RBP17.73■□□□□ 0.43
DDX55-211ENST00000544429 NBASA2RRP1 2371 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 EXPH5Q8NEV8 1989 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 SDHDO14521 159 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 FCHO1O14526 889 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 ZNF195O14628 629 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 HDAC3O15379 428 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 OR2J2O76002 312 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 CBX7O95931 251 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 F10P00742 488 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 PRPS2P11908 318 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 NT5EP21589 574 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 PTGER1P34995 402 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 ZNF385BQ569K4 471 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 FHL5Q5TD97 284 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 IL23RQ5VWK5 629 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 OGFOD2Q6N063 350 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 WDR75Q8IWA0 830 aaKnown RBP17.72■□□□□ 0.43
DDX55-211ENST00000544429 RIMKLAQ8IXN7 391 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 CCDC116Q8IYX3 515 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 LIX1Q8N485 282 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 FNDC5Q8NAU1 212 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 CDC26Q8NHZ8 85 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 SCMH1Q96GD3 660 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 C7orf26Q96N11 449 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 RASL10BQ96S79 203 aa17.72■□□□□ 0.43
DDX55-211ENST00000544429 UTP23Q9BRU9 249 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms