RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 OR4Q2P0C623 313 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 PEPDP12955 493 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 SLC6A4P31645 630 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 NNMTP40261 264 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 PSEN2P49810 448 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 EPHA4P54764 986 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 FOXD4Q12950 439 aaPredicted RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 NTRK2Q16620 822 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 XKR6Q5GH73 641 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 DCST1Q5T197 706 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 OR2G6Q5TZ20 316 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 BHLHB9Q6PI77 547 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 ZNF852Q6ZMS4 543 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 CFAP77Q6ZQR2 320 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 ASB18Q6ZVZ8 466 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 MOB2Q70IA6 237 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 OVCH2Q7RTZ1 564 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 UBE2Q1Q7Z7E8 422 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 MARCH9Q86YJ5 346 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 MS4A15Q8N5U1 240 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 KLHDC9Q8NEP7 349 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 GTF3C2Q8WUA4 911 aaPredicted RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 RIT1Q92963 219 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 PTP4A1Q93096 173 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 FBXO32Q969P5 355 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 EID2BQ96D98 161 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 SGTBQ96EQ0 304 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 C11orf24Q96F05 449 aaPredicted RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 ERMAPQ96PL5 475 aaPredicted RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 SLC12A9Q9BXP2 914 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 SHARPINQ9H0F6 387 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 C1GALT1Q9NS00 363 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 MRPS18AQ9NVS2 196 aaKnown RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 MED9Q9NWA0 146 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 GULP1Q9UBP9 304 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 ZMAT5Q9UDW3 170 aaKnown RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 TRAV6A0A075B6T7 132 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 TEX13CA0A0J9YWL9 993 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 TLX2O43763 284 aaPredicted RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 PRAMEF4O60810 478 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 NCR1O76036 304 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 RECKO95980 971 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 PAHP00439 452 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 LALBAP00709 142 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 HLA-DPB1P04440 258 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 RHOCP08134 193 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 ACP2P11117 423 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 ELK1P19419 428 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 F8A1P23610 371 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 ELAVL4P26378 380 aaKnown RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 RBMS1P29558 406 aaKnown RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 SSTR2P30874 369 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 BTCP35070 178 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 GPR15P49685 360 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 PTPN5P54829 565 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 CASP9P55211 416 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 IRF8Q02556 426 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 CAMK2DQ13557 499 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 STK11Q15831 433 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 PRAMEF9Q5VWM5 478 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 KIAA1211LQ6NV74 962 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 CHMP1BQ7LBR1 199 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 PRICKLE2Q7Z3G6 844 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 FGD2Q7Z6J4 655 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 LRRC28Q86X40 367 aaPredicted RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 TTLQ8NG68 377 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 NEIL3Q8TAT5 605 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 WDR20Q8TBZ3 569 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 GATAD2BQ8WXI9 593 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 MARC2Q969Z3 335 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 DACT3Q96B18 629 aaPredicted RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 PDXPQ96GD0 296 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 LINC00052Q96N35 136 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 UROC1Q96N76 676 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 PKP4Q99569 1192 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 DPYSL5Q9BPU6 564 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 C19orf43Q9BQ61 176 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 THAP7Q9BT49 309 aaPredicted RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 RNF32Q9H0A6 362 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 IFT46Q9NQC8 304 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 ENAMQ9NRM1 1142 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 SDHAF2Q9NX18 166 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 COPZ2Q9P299 210 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 PLXNB3Q9ULL4 1909 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 C2orf78A6NCI8 922 aa9.22□□□□□ -0.93
TCF4-208ENST00000543082 MFSD2BA6NFX1 497 aa9.22□□□□□ -0.93
TCF4-208ENST00000543082 FFAR1O14842 300 aa9.22□□□□□ -0.93
TCF4-208ENST00000543082 SULT1A3P0DMM9 295 aa9.22□□□□□ -0.93
TCF4-208ENST00000543082 SULT1A4P0DMN0 295 aa9.22□□□□□ -0.93
TCF4-208ENST00000543082 CXCL3P19876 107 aa9.22□□□□□ -0.93
TCF4-208ENST00000543082 ITPKAP23677 461 aa9.22□□□□□ -0.93
TCF4-208ENST00000543082 CHI3L1P36222 383 aaPredicted RBP9.22□□□□□ -0.93
TCF4-208ENST00000543082 MMP12P39900 470 aa9.22□□□□□ -0.93
TCF4-208ENST00000543082 DGKGP49619 791 aa9.22□□□□□ -0.93
TCF4-208ENST00000543082 LIM2P55344 173 aa9.22□□□□□ -0.93
TCF4-208ENST00000543082 HBA1P69905 142 aa9.22□□□□□ -0.93
TCF4-208ENST00000543082 RAE1P78406 368 aaKnown RBP9.22□□□□□ -0.93
TCF4-208ENST00000543082 TAP2Q03519 686 aa9.22□□□□□ -0.93
TCF4-208ENST00000543082 DDX39BQ13838 428 aaKnown RBP9.22□□□□□ -0.93
TCF4-208ENST00000543082 SEC23BQ15437 767 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms