RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 SF3A2Q15428 464 aaKnown RBP14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 XKR6Q5GH73 641 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 ZNF655Q8N720 491 aaPredicted RBP14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 VPS37AQ8NEZ2 397 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 ZNF461Q8TAF7 563 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 CEP76Q8TAP6 659 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 OVCA2Q8WZ82 227 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 AP2M1Q96CW1 435 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 DEFB118Q96PH6 123 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 KCNJ15Q99712 375 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 ATF6BQ99941 703 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 HDHD2Q9H0R4 259 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 MED28Q9H204 178 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 BTNL2Q9UIR0 455 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 CORO2BQ9UQ03 480 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 RUVBL1Q9Y265 456 aaKnown RBP14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 SF3B6Q9Y3B4 125 aaKnown RBP14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 YIPF1Q9Y548 306 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 GLYATL1P3A0A0U1RQE8 302 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 A0A1B0GVM2 712 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 RPS10-NUDT3A0A1W2PQS6 291 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 MGAT4DA6NG13 374 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 E7EQ34 232 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 QSOX1O00391 747 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 DVL2O14641 736 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 PRMT3O60678 531 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 JUPP14923 745 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 EPHA5P54756 1037 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 RAB8AP61006 207 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 GALEQ14376 348 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 GPR176Q14439 515 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 PLK5Q496M5 336 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 CCNJQ5T5M9 372 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 TMEM150AQ86TG1 271 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 RBM45Q8IUH3 476 aaKnown RBP14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 TMEM163Q8TC26 289 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 AUTS2Q8WXX7 1259 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 AP3S1Q92572 193 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 VWCEQ96DN2 955 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 TOE1Q96GM8 510 aaKnown RBP14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 WFDC6Q9BQY6 131 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 RSPO3Q9BXY4 272 aaPredicted RBP14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 DNAJC11Q9NVH1 559 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 SAGE1Q9NXZ1 904 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 SLCO1C1Q9NYB5 712 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 HCN2Q9UL51 889 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 ING4Q9UNL4 249 aa14.09□□□□□ -0.15
AC005840.4-201ENST00000541242 LZTS3O60299 673 aaPredicted RBP14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 MPC2O95563 127 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 GNRH1P01148 92 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 HIST1H2AGP0C0S8 130 aaPredicted RBP14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 HIST1H2ADP20671 130 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 PPIBP23284 216 aaKnown RBP14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 CSTF1Q05048 431 aaKnown RBP14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 BCL2L1Q07817 233 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 LRRC74AQ0VAA2 488 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 DOC2AQ14183 400 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 SLC5A12Q1EHB4 618 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 TMEM201Q5SNT2 666 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 METTL2BQ6P1Q9 378 aaKnown RBP14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 MACC1Q6ZN28 852 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 CHST9Q7L1S5 443 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 TSPAN33Q86UF1 283 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 HIST1H2AHQ96KK5 128 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 HIST1H2AJQ99878 128 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 H2AFJQ9BTM1 129 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 TRAF4Q9BUZ4 470 aaPredicted RBP14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 C1GALT1Q9NS00 363 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 LHX3Q9UBR4 397 aa14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 ZNF282Q9UDV7 671 aaPredicted RBP14.08□□□□□ -0.15
AC005840.4-201ENST00000541242 COL4A6Q14031 1691 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 PCP4L1A6NKN8 68 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 FZD6O60353 706 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 RAB36O95755 333 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 CFDP00746 253 aaPredicted RBP14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 IFNW1P05000 195 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 RHCEP18577 417 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 IRS1P35568 1242 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 BDKRB1P46663 353 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 CCT3P49368 545 aaKnown RBP14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 CLCNKAP51800 687 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 PFN3P60673 137 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 RHOAP61586 193 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 CTAG1AP78358 180 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 LSM11P83369 360 aaKnown RBP eCLIP14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 ZMYND11Q15326 602 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 C12orf73Q69YU5 71 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 BRAT1Q6PJG6 821 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 QSOX2Q6ZRP7 698 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 TRILQ7L0X0 811 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 MEX3DQ86XN8 651 aaKnown RBP14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 KIF18BQ86Y91 864 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 ZBTB44Q8NCP5 570 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 WDR20Q8TBZ3 569 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 WFDC5Q8TCV5 224 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 FOXJ1Q92949 421 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 RIT1Q92963 219 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 UCN3Q969E3 161 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 MYO19Q96H55 970 aa14.08□□□□□ -0.16
AC005840.4-201ENST00000541242 TMED9Q9BVK6 235 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms