RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 ZNF223Q9UK11 482 aaPredicted RBP13.23□□□□□ -0.29
LTBR-209ENST00000541102 ADAM29Q9UKF5 820 aa13.23□□□□□ -0.29
LTBR-209ENST00000541102 DLGAP4Q9Y2H0 992 aa13.23□□□□□ -0.29
LTBR-209ENST00000541102 POLR3HQ9Y535 204 aaPredicted RBP13.23□□□□□ -0.29
LTBR-209ENST00000541102 C17orf105B2RV13 164 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 SLC28A1O00337 649 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 ZNF195O14628 629 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 PCDH7O60245 1069 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 FGF17O60258 216 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 PRKNO60260 465 aaPredicted RBP13.22□□□□□ -0.29
LTBR-209ENST00000541102 PEX11AO75192 247 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 SEC22BO75396 215 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 ITGA10O75578 1167 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 SLC25A12O75746 678 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 RSL1D1O76021 490 aaKnown RBP13.22□□□□□ -0.29
LTBR-209ENST00000541102 WISP2O76076 250 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 CHEK2O96017 543 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 LDLRP01130 860 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 TACR1P25103 407 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 TLX1P31314 330 aaPredicted RBP13.22□□□□□ -0.29
LTBR-209ENST00000541102 HK2P52789 917 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 TNFRSF17Q02223 184 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 ALDH6A1Q02252 535 aaKnown RBP13.22□□□□□ -0.29
LTBR-209ENST00000541102 ACSM2AQ08AH3 577 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 SERTAD2Q14140 314 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 IMPG1Q17R60 797 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 PRSS53Q2L4Q9 553 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 GALNTL6Q49A17 601 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 C4orf17Q53FE4 359 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 ACSM2BQ68CK6 577 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 CYP20A1Q6UW02 462 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 FAM47EQ6ZV65 393 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 WDR75Q8IWA0 830 aaKnown RBP13.22□□□□□ -0.29
LTBR-209ENST00000541102 TRIM42Q8IWZ5 723 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 ZNF321PQ8N8H1 164 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 OR14A16Q8NHC5 309 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 DOK4Q8TEW6 326 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 DYDC1Q8WWB3 177 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 TMEM125Q96AQ2 219 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 PPWD1Q96BP3 646 aaKnown RBP13.22□□□□□ -0.29
LTBR-209ENST00000541102 NUF2Q9BZD4 464 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 RPF2Q9H7B2 306 aaKnown RBP13.22□□□□□ -0.29
LTBR-209ENST00000541102 MS4A12Q9NXJ0 267 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 HEY2Q9UBP5 337 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 PLEKHB1Q9UF11 243 aaPredicted RBP13.22□□□□□ -0.29
LTBR-209ENST00000541102 PHF11Q9UIL8 331 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 PPIEQ9UNP9 301 aaKnown RBP13.22□□□□□ -0.29
LTBR-209ENST00000541102 PCDHGB6Q9Y5F9 930 aa13.22□□□□□ -0.29
LTBR-209ENST00000541102 SYNDIG1LA6NDD5 238 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 NPIPB8E9PQR5 432 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 RGS14O43566 566 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 PRPH2P23942 346 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 TIA1P31483 386 aaKnown RBP eCLIP13.21□□□□□ -0.29
LTBR-209ENST00000541102 TRHRP34981 398 aaPredicted RBP13.21□□□□□ -0.29
LTBR-209ENST00000541102 MAPK12P53778 367 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 RPL38P63173 70 aaKnown RBP13.21□□□□□ -0.29
LTBR-209ENST00000541102 GUCY1A3Q02108 690 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 ZNF750Q32MQ0 723 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 SPIN4Q56A73 249 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 C1QL3Q5VWW1 255 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 FAM180BQ6P0A1 224 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 GALNT18Q6P9A2 607 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 HSDL2Q6YN16 418 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 FJX1Q86VR8 437 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 ZNF227Q86WZ6 799 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 FAM98AQ8NCA5 519 aaKnown RBP13.21□□□□□ -0.29
LTBR-209ENST00000541102 MORN4Q8NDC4 146 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 LRRC8CQ8TDW0 803 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 C16orf78Q8WTQ4 265 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 NUDT8Q8WV74 236 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 RBM18Q96H35 190 aaKnown RBP13.21□□□□□ -0.29
LTBR-209ENST00000541102 EGLN2Q96KS0 407 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 FCRL1Q96LA6 429 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 MAGEB18Q96M61 343 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 DGAT2Q96PD7 388 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 C1orf50Q9BV19 199 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 NMRK1Q9NWW6 199 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 C1orf109Q9NX04 203 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 LYARQ9NX58 379 aaKnown RBP13.21□□□□□ -0.29
LTBR-209ENST00000541102 SIRT5Q9NXA8 310 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 AHSPQ9NZD4 102 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 MCM8Q9UJA3 840 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 EXO1Q9UQ84 846 aaKnown RBP13.21□□□□□ -0.29
LTBR-209ENST00000541102 ERVK-11Q9UQG0 969 aa13.21□□□□□ -0.29
LTBR-209ENST00000541102 UTP20O75691 2785 aaKnown RBP13.21□□□□□ -0.29
LTBR-209ENST00000541102 TRGV8A0A0C4DH27 118 aa13.2□□□□□ -0.3
LTBR-209ENST00000541102 WIPF3A6NGB9 483 aa13.2□□□□□ -0.3
LTBR-209ENST00000541102 NPIPA5E9PKD4 350 aa13.2□□□□□ -0.3
LTBR-209ENST00000541102 WWP2O00308 870 aa13.2□□□□□ -0.3
LTBR-209ENST00000541102 CDK2AP1O14519 115 aa13.2□□□□□ -0.3
LTBR-209ENST00000541102 SDHDO14521 159 aa13.2□□□□□ -0.3
LTBR-209ENST00000541102 NME2P1O60361 137 aa13.2□□□□□ -0.3
LTBR-209ENST00000541102 OR2J2O76002 312 aa13.2□□□□□ -0.3
LTBR-209ENST00000541102 IL3P08700 152 aa13.2□□□□□ -0.3
LTBR-209ENST00000541102 ANXA4P09525 319 aaPredicted RBP13.2□□□□□ -0.3
LTBR-209ENST00000541102 COX7A2P14406 83 aa13.2□□□□□ -0.3
LTBR-209ENST00000541102 NME2P22392 152 aa13.2□□□□□ -0.3
LTBR-209ENST00000541102 BUD31P41223 144 aaPredicted RBP13.2□□□□□ -0.3
LTBR-209ENST00000541102 SSR4P51571 173 aa13.2□□□□□ -0.3
LTBR-209ENST00000541102 GYS2P54840 703 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms