RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TRIOO75962 3097 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 CD8B2A6NJW9 211 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 GTPBP1O00178 669 aaKnown RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 LEFTY2O00292 366 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC28A2O43868 658 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 C1orf105O95561 183 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 TBX6O95947 436 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 CD8BP10966 210 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 CCR2P41597 374 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 GSTM5P46439 218 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 DGKGP49619 791 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 HMGA2P52926 109 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 KRR1Q13601 381 aaKnown RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZNF791Q3KP31 576 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 CNIH2Q6PI25 160 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 CAMKMTQ7Z624 323 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR7G1Q8NGA0 311 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 FIBINQ8TAL6 211 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 OVCA2Q8WZ82 227 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 FRMD6Q96NE9 622 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 MND1Q9BWT6 205 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC22A4Q9H015 551 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 TMEM38AQ9H6F2 299 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 RNF121Q9H920 327 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 BRF2Q9HAW0 419 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 MRPL17Q9NRX2 175 aaKnown RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 TEX10Q9NXF1 929 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 TRPC4Q9UBN4 977 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SEC14L4Q9UDX3 406 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SPTBP11277 2137 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 ATG2BQ96BY7 2078 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZC3H12DA2A288 527 aaKnown RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 TNFRSF10AO00220 468 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SCAMP1O15126 338 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 CA12O43570 354 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 EIF2S1P05198 315 aaKnown RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 H1F0P07305 194 aaKnown RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SYPP08247 313 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 EVI2BP34910 448 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 RHAGQ02094 409 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 E2F2Q14209 437 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 TCEA2Q15560 299 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZNF630Q2M218 657 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 YIF1BQ5BJH7 314 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 KRT73Q86Y46 540 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 TMC8Q8IU68 726 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 TIGD4Q8IY51 512 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 VN1R2Q8NFZ6 395 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 DOK4Q8TEW6 326 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 AP2M1Q96CW1 435 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 TCEAL4Q96EI5 215 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SENP5Q96HI0 755 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 WACQ9BTA9 647 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC46A2Q9BY10 475 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 MCUBQ9NWR8 336 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 LSM7Q9UK45 103 aaKnown RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC5A10A0PJK1 596 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SH3D21A4FU49 640 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 PLPP1O14494 284 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 TEX28O15482 410 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SCO1O75880 301 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 EPHB3P54753 998 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 TAP2Q03519 686 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SNAPC1Q16533 368 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 BTBD16Q32M84 506 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC35F1Q5T1Q4 408 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 HENMT1Q5T8I9 393 aaKnown RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 KIF18BQ86Y91 864 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 VWA5B2Q8N398 1253 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 BBS1Q8NFJ9 593 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR6T1Q8NGN1 323 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR5AR1Q8NGP9 310 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SMAP2Q8WU79 429 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZG16BQ96DA0 208 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZNF582Q96NG8 517 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 NLNQ9BYT8 704 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 FZD3Q9NPG1 666 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 TM7SF3Q9NS93 570 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SEC14L3Q9UDX4 400 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 FBXW2Q9UKT8 454 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 CLEC4AQ9UMR7 237 aa9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 KIF26AQ9ULI4 1882 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-207ENST00000540998 SPTBN5Q9NRC6 3674 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 HMGN4O00479 90 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 CASKO14936 926 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 POLR1CO15160 346 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC16A5O15375 505 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 UGDHO60701 494 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC2A10O95528 541 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 POP4O95707 220 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 TIMP2P16035 220 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 MAPK8P45983 427 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 C21orf58P58505 322 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 IL18Q14116 193 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 FAM83HQ6ZRV2 1179 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 ASB18Q6ZVZ8 466 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 C6orf120Q7Z4R8 191 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 LRRTM4Q86VH4 590 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 CRIPAKQ8N1N5 446 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms