RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 KRTAP11-1Q8IUC1 163 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 TMEM126BQ8IUX1 230 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 NUP93Q8N1F7 819 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 Q8N7P7 452 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 GTSF1Q8WW33 167 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 FRAT1Q92837 279 aaPredicted RBP4.36□□□□□ -1.71
YBX3-210ENST00000540975 ZWILCHQ9H900 591 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 MLXQ9UH92 298 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 TEKT2Q9UIF3 430 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 DHX57Q6P158 1386 aaKnown RBP4.36□□□□□ -1.71
YBX3-210ENST00000540975 CUX2O14529 1486 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 COL16A1Q07092 1604 aaPredicted RBP4.35□□□□□ -1.71
YBX3-210ENST00000540975 TMEM129A0AVI4 362 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 HTATSF1O43719 755 aaKnown RBP4.35□□□□□ -1.71
YBX3-210ENST00000540975 TPM3P06753 285 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 NUDT17P0C025 328 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 CPA3P15088 417 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 GLULP15104 373 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 B4GALT1P15291 398 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 ZNF131P52739 623 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 HEPACAMQ14CZ8 416 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 UNC50Q53HI1 259 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 DNAJC21Q5F1R6 531 aaKnown RBP4.35□□□□□ -1.71
YBX3-210ENST00000540975 Q6ZRG5 221 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 UBTD2Q8WUN7 234 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 TAF4BQ92750 862 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 HAS2Q92819 552 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 BADQ92934 168 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 EPSTI1Q96J88 318 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 B3GALT6Q96L58 329 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 ZNF396Q96N95 335 aaPredicted RBP4.35□□□□□ -1.71
YBX3-210ENST00000540975 NTMT1Q9BV86 223 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 NAPBQ9H115 298 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 EIF3KQ9UBQ5 218 aaKnown RBP4.35□□□□□ -1.71
YBX3-210ENST00000540975 RABL2BQ9UNT1 228 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 KCNK6Q9Y257 313 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 SMARCA2P51531 1590 aa4.35□□□□□ -1.71
YBX3-210ENST00000540975 A0A1W2PRQ8 180 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 TSC22D2O75157 780 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 ZNF19P17023 458 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 CYP3A5P20815 502 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 CALML3P27482 149 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 TNFSF10P50591 281 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 SNU13P55769 128 aaKnown RBP4.34□□□□□ -1.71
YBX3-210ENST00000540975 TTC31Q49AM3 519 aaPredicted RBP4.34□□□□□ -1.71
YBX3-210ENST00000540975 ODF2Q5BJF6 829 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 CD164L2Q6UWJ8 174 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 ARL14Q8N4G2 192 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 FBXO25Q8TCJ0 367 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 FAM46BQ96A09 425 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 VMP1Q96GC9 406 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 CYYR1Q96J86 154 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 CAPNS2Q96L46 248 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 SPAG8Q99932 426 aaPredicted RBP4.34□□□□□ -1.71
YBX3-210ENST00000540975 LZTS2Q9BRK4 669 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 TSPYL1Q9H0U9 437 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 HOXC10Q9NYD6 342 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 TAS2R16Q9NYV7 291 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 EXOC7Q9UPT5 735 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 LIPT1Q9Y234 373 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 IKBKGQ9Y6K9 419 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 CECR2Q9BXF3 1484 aa4.34□□□□□ -1.71
YBX3-210ENST00000540975 EIF4G1Q04637 1599 aaKnown RBP4.34□□□□□ -1.71
YBX3-210ENST00000540975 GOLGA3Q08378 1498 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 CEP162Q5TB80 1403 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 A0A0A6YYC8 382 aaPredicted RBP4.33□□□□□ -1.72
YBX3-210ENST00000540975 I3L1I5 382 aaPredicted RBP4.33□□□□□ -1.72
YBX3-210ENST00000540975 TXNDC12O95881 172 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 GAS8O95995 478 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 CHRNGP07510 517 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 CT45A8P0DMV1 189 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 CT45A9P0DMV2 189 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 P4HA1P13674 534 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 ROR1Q01973 937 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 PAX2Q02962 417 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 HSPA14Q0VDF9 509 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 STX1AQ16623 288 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 CT45A2Q5DJT8 189 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 KCTD11Q693B1 232 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 RHBDD2Q6NTF9 364 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 C11orf88Q6PI97 169 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 SYCP3Q8IZU3 236 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 SLC34A3Q8N130 599 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 PARP8Q8N3A8 854 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 OR4L1Q8NH43 312 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 ST6GALNAC5Q9BVH7 336 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 XPO4Q9C0E2 1151 aaKnown RBP4.33□□□□□ -1.72
YBX3-210ENST00000540975 Q9HAA7 133 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 SLC25A19Q9HC21 320 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 SEC14L4Q9UDX3 406 aa4.33□□□□□ -1.72
YBX3-210ENST00000540975 BAZ1BQ9UIG0 1483 aaKnown RBP4.32□□□□□ -1.72
YBX3-210ENST00000540975 CEP164Q9UPV0 1460 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 TMEM110-MUSTN1A8MSY1 372 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 MEI4A8MW99 385 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 H0Y626 953 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 TSPAN2O60636 221 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 VCLP18206 1134 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 MEOX2P50222 304 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 TMED1Q13445 227 aa4.32□□□□□ -1.72
YBX3-210ENST00000540975 PPP1R3AQ16821 1122 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms