RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 GK3PQ14409 553 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 SLC9A5Q14940 896 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 PLCL1Q15111 1095 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 SLC5A12Q1EHB4 618 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 ALG11Q2TAA5 492 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 GRAMD1BQ3KR37 738 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 TBCELQ5QJ74 424 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 TMTC4Q5T4D3 741 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 DCAF12Q5T6F0 453 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 OGFRL1Q5TC84 451 aaPredicted RBP7.89□□□□□ -1.15
CHD4-208ENST00000540960 PRAMEF9Q5VWM5 478 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 GLYATQ6IB77 296 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 IYDQ6PHW0 289 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 ZNF621Q6ZSS3 439 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 TAF8Q7Z7C8 310 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 SPNS2Q8IVW8 549 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 MICU2Q8IYU8 434 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 RNF148Q8N7C7 305 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 BMPERQ8N8U9 685 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 ANKFN1Q8N957 763 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 CAMKVQ8NCB2 501 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 GPR156Q8NFN8 814 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 OR2L3Q8NG85 312 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 OR2A1Q8NGT9 310 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 C16orf78Q8WTQ4 265 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 OR5P2Q8WZ92 322 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 FAM162AQ96A26 154 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 PNPLA2Q96AD5 504 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 ARSGQ96EG1 525 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 ZBED6CLQ96FA7 236 aaPredicted RBP7.89□□□□□ -1.15
CHD4-208ENST00000540960 MENTQ9BUN1 341 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 REXO4Q9GZR2 422 aaKnown RBP7.89□□□□□ -1.15
CHD4-208ENST00000540960 PAIP1Q9H074 479 aaKnown RBP7.89□□□□□ -1.15
CHD4-208ENST00000540960 EPB41L1Q9H4G0 881 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 KAT8Q9H7Z6 458 aaKnown RBP7.89□□□□□ -1.15
CHD4-208ENST00000540960 DDX31Q9H8H2 851 aaKnown RBP7.89□□□□□ -1.15
CHD4-208ENST00000540960 CLK4Q9HAZ1 481 aaKnown RBP7.89□□□□□ -1.15
CHD4-208ENST00000540960 ACSS1Q9NUB1 689 aaPredicted RBP7.89□□□□□ -1.15
CHD4-208ENST00000540960 OLAHQ9NV23 265 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 MS4A12Q9NXJ0 267 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 TAS2R7Q9NYW3 318 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 AKAP7Q9P0M2 348 aaPredicted RBP7.89□□□□□ -1.15
CHD4-208ENST00000540960 SH3BP4Q9P0V3 963 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 TBC1D29Q9UFV1 150 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 DOLKQ9UPQ8 538 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 ICKQ9UPZ9 632 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 DTNAQ9Y4J8 743 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 TRBV5-3A0A0A0MS03 114 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 ASPDHA6ND91 283 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 H3BNX3 289 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 H7BY64 318 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 CLIC1O00299 241 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 ZSCAN9O15535 394 aaPredicted RBP7.88□□□□□ -1.15
CHD4-208ENST00000540960 AKAP10O43572 662 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 BMP10O95393 424 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 CPNE6O95741 557 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 KLK1P06870 262 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 GPX2P18283 190 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 DDCP20711 480 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 TLX1P31314 330 aaPredicted RBP7.88□□□□□ -1.15
CHD4-208ENST00000540960 CSTF2P33240 577 aaKnown RBP eCLIP7.88□□□□□ -1.15
CHD4-208ENST00000540960 DLSTP36957 453 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 ARHGDIAP52565 204 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 TLE4Q04727 773 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 KLC1Q07866 573 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 EPS8Q12929 822 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 MED21Q13503 144 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 MYBPC3Q14896 1274 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 MLC1Q15049 377 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 VWA2Q5GFL6 755 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 RABL3Q5HYI8 236 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 CRB2Q5IJ48 1285 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 OR4C11Q6IEV9 310 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 FAM71E1Q6IPT2 247 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 IRGCQ6NXR0 463 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 IZUMO2Q6UXV1 221 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 RD3Q7Z3Z2 195 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 IFNEQ86WN2 208 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 CARFQ8N187 725 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 ZCCHC7Q8N3Z6 543 aaKnown RBP7.88□□□□□ -1.15
CHD4-208ENST00000540960 KRTCAP2Q8N6L1 136 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 C11orf65Q8NCR3 313 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 OR2L5Q8NG80 312 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 CDC26Q8NHZ8 85 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.88□□□□□ -1.15
CHD4-208ENST00000540960 LZICQ8WZA0 190 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 RSC1A1Q92681 617 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 NRGNQ92686 78 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 TSACCQ96A04 125 aaPredicted RBP7.88□□□□□ -1.15
CHD4-208ENST00000540960 RERGQ96A58 199 aaPredicted RBP7.88□□□□□ -1.15
CHD4-208ENST00000540960 RDH12Q96NR8 316 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 PRAP1Q96NZ9 151 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 IL17FQ96PD4 163 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 BARD1Q99728 777 aaKnown RBP7.88□□□□□ -1.15
CHD4-208ENST00000540960 CPPED1Q9BRF8 314 aaPredicted RBP7.88□□□□□ -1.15
CHD4-208ENST00000540960 SLC39A3Q9BRY0 314 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 ACAT2Q9BWD1 397 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 OSBPL11Q9BXB4 747 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 TWSG1Q9GZX9 223 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 OR51B5Q9H339 312 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms