RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 MRM1Q6IN84 353 aaKnown RBP6.67□□□□□ -1.34
YBX3-209ENST00000540747 PRSS57Q6UWY2 283 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 SYDE1Q6ZW31 735 aaPredicted RBP6.67□□□□□ -1.34
YBX3-209ENST00000540747 PM20D2Q8IYS1 436 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 ST13P4Q8IZP2 240 aaPredicted RBP6.67□□□□□ -1.34
YBX3-209ENST00000540747 TCAIMQ8N3R3 496 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 ZCCHC7Q8N3Z6 543 aaKnown RBP6.67□□□□□ -1.34
YBX3-209ENST00000540747 LIX1Q8N485 282 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 MMGT1Q8N4V1 131 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 NOA1Q8NC60 698 aaKnown RBP6.67□□□□□ -1.34
YBX3-209ENST00000540747 PDPRQ8NCN5 879 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 FAM13CQ8NE31 585 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 SRFBP1Q8NEF9 429 aaKnown RBP6.67□□□□□ -1.34
YBX3-209ENST00000540747 SPATA3Q8NHX4 192 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 SPPL2AQ8TCT8 520 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 ZPLD1Q8TCW7 415 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 IGFBPL1Q8WX77 278 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 TANKQ92844 425 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 ISL2Q96A47 359 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 PPWD1Q96BP3 646 aaKnown RBP6.67□□□□□ -1.34
YBX3-209ENST00000540747 LRRC39Q96DD0 335 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 VPS39Q96JC1 886 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 PBKQ96KB5 322 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 PKNOX2Q96KN3 472 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 ART5Q96L15 291 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 MARK4Q96L34 752 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 DGAT2Q96PD7 388 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 UCN2Q96RP3 112 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 DOHHQ9BU89 302 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 G6PC3Q9BUM1 346 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 SORBS1Q9BX66 1292 aaKnown RBP6.67□□□□□ -1.34
YBX3-209ENST00000540747 EPB41L4BQ9H329 900 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.67□□□□□ -1.34
YBX3-209ENST00000540747 GALNT8Q9NY28 637 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 ADAM21Q9UKJ8 722 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 CHMP2BQ9UQN3 213 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 SLC6A5Q9Y345 797 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 TESMINQ9Y4I5 508 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 RAI1Q7Z5J4 1906 aaPredicted RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 EXPH5Q8NEV8 1989 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 A0A1W2PS29 197 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 SH3D21A4FU49 640 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 NCF1BA6NI72 391 aaPredicted RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 WASHC1A8K0Z3 465 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 NCF1CA8MVU1 366 aaPredicted RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 DEFB108AA8MXU0 73 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 EEF1E1-BLOC1S5C9J1V9 151 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 H7C1Q1 480 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 PLPP1O14494 284 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 CLGNO14967 610 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 EEF1E1O43324 174 aaKnown RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 PRKRAO75569 313 aaKnown RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 STK16O75716 305 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 SNX4O95219 450 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 ACSL3O95573 720 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 GPR75O95800 540 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 NCF1P14598 390 aaPredicted RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 CPN1P15169 458 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 CD1DP15813 335 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 CPN2P22792 545 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 LOXP28300 417 aaPredicted RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 PTPN6P29350 595 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 SERPINB1P30740 379 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 PTGDSP41222 190 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 MSH2P43246 934 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 RPL21P46778 160 aaKnown RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 HSPA7P48741 367 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 AGFG1P52594 562 aaKnown RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 ARFIP1P53367 373 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 NAGLUP54802 743 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 FBXW4P57775 412 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 VSNL1P62760 191 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 HERVK_113P63132 956 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 ERVK-8P63133 956 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 MGAT5Q09328 741 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 FUT7Q11130 342 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 CHIT1Q13231 466 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 LAPTM5Q13571 262 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 CASP8Q14790 479 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 SF3B4Q15427 424 aaKnown RBP eCLIP6.66□□□□□ -1.342e-7■■■□□ 18.1
YBX3-209ENST00000540747 OR4D1Q15615 310 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 EIPR1Q53HC9 387 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 FBXO48Q5FWF7 155 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 DEPDC1Q5TB30 811 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 KHDRBS2Q5VWX1 349 aaKnown RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 C18orf63Q68DL7 685 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 TIGD3Q6B0B8 471 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 SULT1C3Q6IMI6 304 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 TMEM81Q6P7N7 255 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 TMEM64Q6YI46 380 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 RNF111Q6ZNA4 994 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 CXXC5Q7LFL8 322 aaKnown RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 LRRC70Q7Z2Q7 622 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 ZNF615Q8N8J6 731 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 OR7G3Q8NG95 312 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 PPP1R14CQ8TAE6 165 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 ACTRT1Q8TDG2 376 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 DOK4Q8TEW6 326 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 GRK7Q8WTQ7 553 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 UBTD2Q8WUN7 234 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms