RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 OR6C75A6NL08 312 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 ANXA2P2A6NMY6 339 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 H7C4K7 107 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 TPST2O60704 377 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 S100A8P05109 93 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 SULT1A3P0DMM9 295 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 SULT1A4P0DMN0 295 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 TSPAN7P41732 249 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 PXNP49023 591 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 CAV3P56539 151 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 PUM1Q14671 1186 aaKnown RBP eCLIP9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 KIAA0040Q15053 153 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 MAPKAPK3Q16644 382 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 MICBQ29980 383 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 ARHGAP15Q53QZ3 475 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 FAM74A1Q5RGS3 127 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 TMEM88Q6PEY1 159 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 METAP1DQ6UB28 335 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 ZNF730Q6ZMV8 503 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 GPRIN1Q7Z2K8 1008 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 CALHM3Q86XJ0 350 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 IL17RCQ8NAC3 791 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 OR9Q1Q8NGQ5 310 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 ZDHHC1Q8WTX9 485 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 AP3S1Q92572 193 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 POP5Q969H6 163 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 PDCD10Q9BUL8 212 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 RERGLQ9H628 205 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 GAREM1Q9H706 876 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 CSNK1G1Q9HCP0 422 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 PPP1R14DQ9NXH3 145 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 ZNF225Q9UK10 706 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 HCN2Q9UL51 889 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 CLCA2Q9UQC9 943 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 PTPRSQ13332 1948 aa9.01□□□□□ -0.97
CTNNA1-243ENST00000540387 CHD9Q3L8U1 2897 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 C17orf113A0A1B0GUU1 675 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 A0A1B0GWJ7 208 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 LINC01553A4QN01 128 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 DBX1A6NMT0 343 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 CSO75390 466 aaKnown RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 CLN5O75503 358 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 ESR1P03372 595 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 UROSP10746 265 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 CD1DP15813 335 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 ENGP17813 658 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 C4BPBP20851 252 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 ITPKAP23677 461 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 HOXC13P31276 330 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 GPX4P36969 197 aaPredicted RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 RPL34P49207 117 aaKnown RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 EVX1P49640 407 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 GZMMP51124 257 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 CTBP2P56545 445 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 ADIGQ0VDE8 80 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 CCINQ13939 588 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 RBMS2Q15434 407 aaKnown RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 SPHARQ15513 63 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 TAF1AQ15573 450 aaPredicted RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 HECTD3Q5T447 861 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 SFRP5Q5T4F7 317 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 SDHAF4Q5VUM1 108 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 ATG9BQ674R7 924 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 Q6ZSR9 355 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 ASB18Q6ZVZ8 466 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 VTCN1Q7Z7D3 282 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 SCN4BQ8IWT1 228 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 DMRTC2Q8IXT2 367 aaPredicted RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 GPR150Q8NGU9 434 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 OR1S1Q8NH92 325 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 SCARB1Q8WTV0 552 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 GLYATL2Q8WU03 294 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 KATNB1Q9BVA0 655 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 CPEB1Q9BZB8 566 aaKnown RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 HDHD2Q9H0R4 259 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 ANKRD19PQ9H560 264 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 PRMT8Q9NR22 394 aaPredicted RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 SLC6A13Q9NSD5 602 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 CNOT2Q9NZN8 540 aaKnown RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 SEC14L3Q9UDX4 400 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 CLEC2DQ9UHP7 191 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 PCDHGA2Q9Y5H1 932 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 VWA8A3KMH1 1905 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 NUP205Q92621 2012 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 MYO7AQ13402 2215 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 TEX13CA0A0J9YWL9 993 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 HHLA1C9JL84 531 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 CASC3O15234 703 aaKnown RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 CCNB2O95067 398 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 GADD45GO95257 159 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 SIX6O95475 246 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 VNN2O95498 520 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 POP4O95707 220 aaKnown RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 FBP1P09467 338 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 CD53P19397 219 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 CXCL2P19875 107 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 PVALBP20472 110 aaPredicted RBP9□□□□□ -0.97
CTNNA1-243ENST00000540387 AKT1P31749 480 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 RORAP35398 523 aa9□□□□□ -0.97
CTNNA1-243ENST00000540387 PPM1AP35813 382 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms