RNA–Protein interactions for RNA: ENST00000540249.5

PDHA1-212, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene PDHA1, Length 3,277 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-212ENST00000540249 DEDD2Q8WXF8 326 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 SLC25A46Q96AG3 418 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 GPA33Q99795 319 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 SPATA9Q9BWV2 254 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 BRF2Q9HAW0 419 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 LSM2Q9Y333 95 aaKnown RBP12.86□□□□□ -0.35
PDHA1-212ENST00000540249 INSL5Q9Y5Q6 135 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 HELZP42694 1942 aaKnown RBP12.86□□□□□ -0.35
PDHA1-212ENST00000540249 SCN8AQ9UQD0 1980 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 ARHGEF9O43307 516 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 CELP19835 753 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 EEF1A2Q05639 463 aaKnown RBP12.86□□□□□ -0.35
PDHA1-212ENST00000540249 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.86□□□□□ -0.35
PDHA1-212ENST00000540249 EFR3AQ14156 821 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 E2F2Q14209 437 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 ZNF791Q3KP31 576 aaPredicted RBP12.86□□□□□ -0.35
PDHA1-212ENST00000540249 SMUG1Q53HV7 270 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 LCN1P1Q5VSP4 162 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 C6orf120Q7Z4R8 191 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 FAM20CQ8IXL6 584 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
PDHA1-212ENST00000540249 OR8J1Q8NGP2 316 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 OVCA2Q8WZ82 227 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 CLIP3Q96DZ5 547 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 DHRS1Q96LJ7 313 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 KATNB1Q9BVA0 655 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 PLA2G12AQ9BZM1 189 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 RETREG1Q9H6L5 497 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 SLC25A19Q9HC21 320 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 EQTNQ9NQ60 294 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 SPG21Q9NZD8 308 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 PLXND1Q9Y4D7 1925 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 CENPBD1B2RD01 187 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 SLC16A5O15375 505 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 HRO43593 1189 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 ERAL1O75616 437 aaKnown RBP12.86□□□□□ -0.35
PDHA1-212ENST00000540249 ALX3O95076 343 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 ELFN1P0C7U0 828 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 C1GALT1C1LP0DN25 315 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 NR2F6P10588 404 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.86□□□□□ -0.353e-8■■□□□ 11.5
PDHA1-212ENST00000540249 ZNF770Q6IQ21 691 aaPredicted RBP12.86□□□□□ -0.35
PDHA1-212ENST00000540249 DDX53Q86TM3 631 aaKnown RBP12.86□□□□□ -0.35
PDHA1-212ENST00000540249 OR4F15Q8NGB8 312 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 OR4K5Q8NGD3 323 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 OR5H6Q8NGV6 325 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 FIBINQ8TAL6 211 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 RNFT2Q96EX2 444 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 NDUFB11Q9NX14 153 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 ATP6V1HQ9UI12 483 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 HCN2Q9UL51 889 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 ASF1AQ9Y294 204 aa12.86□□□□□ -0.35
PDHA1-212ENST00000540249 A0A0X1KG70 313 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 UGDHO60701 494 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 MMP11P24347 488 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 PSMB5P28074 263 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 FABP5Q01469 135 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 CSTF1Q05048 431 aaKnown RBP12.85□□□□□ -0.35
PDHA1-212ENST00000540249 SYT14P1Q58G82 188 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 SLC35F1Q5T1Q4 408 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 Q6ZNB5 142 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 OR2A12Q8NGT7 310 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.85□□□□□ -0.351e-18■■■■□ 19.4
PDHA1-212ENST00000540249 SETD6Q8TBK2 473 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 VOPP1Q96AW1 172 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 UCKL1Q9NWZ5 548 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 ENOPH1Q9UHY7 261 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 CLCA2Q9UQC9 943 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 KNL1Q8NG31 2342 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 A0A0G2JMP0 313 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.85□□□□□ -0.35
PDHA1-212ENST00000540249 A0A1W2PQ72 361 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 LEFTY2O00292 366 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 ADAP00813 363 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 C8orf89P0DMQ9 161 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 MAP2K3P46734 347 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 LIMS1P48059 325 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 POLR2LP62875 67 aaKnown RBP12.85□□□□□ -0.35
PDHA1-212ENST00000540249 GPR19Q15760 415 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 FAM71E1Q6IPT2 247 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 SDE2Q6IQ49 451 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 TTC23LQ6PF05 361 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 C19orf48Q6RUI8 117 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 ELMOD2Q8IZ81 293 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 ARSGQ96EG1 525 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 LYSMD1Q96S90 227 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 TMEM38AQ9H6F2 299 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 HCFC1R1Q9NWW0 138 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 NPAP1Q9NZP6 1156 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 TRAPPC4Q9Y296 219 aa12.85□□□□□ -0.35
PDHA1-212ENST00000540249 SCAMP1O15126 338 aa12.84□□□□□ -0.35
PDHA1-212ENST00000540249 POLR1CO15160 346 aaPredicted RBP12.84□□□□□ -0.35
PDHA1-212ENST00000540249 DPM1O60762 260 aa12.84□□□□□ -0.35
PDHA1-212ENST00000540249 C1orf105O95561 183 aa12.84□□□□□ -0.35
PDHA1-212ENST00000540249 UQCRC1P31930 480 aa12.84□□□□□ -0.35
PDHA1-212ENST00000540249 PCBP3P57721 371 aaKnown RBP12.84□□□□□ -0.35
PDHA1-212ENST00000540249 ZNF750Q32MQ0 723 aa12.84□□□□□ -0.35
PDHA1-212ENST00000540249 XKRXQ6PP77 449 aa12.84□□□□□ -0.35
PDHA1-212ENST00000540249 ZER1Q7Z7L7 766 aa12.84□□□□□ -0.35
PDHA1-212ENST00000540249 MARCH9Q86YJ5 346 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms