RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ARHGEF7Q14155 803 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 FCN2Q15485 313 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 NDUFAF5Q5TEU4 345 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 HSDL2Q6YN16 418 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 DEF8Q6ZN54 512 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 NLRP8Q86W28 1048 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 TMEM25Q86YD3 366 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 TMC8Q8IU68 726 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 FTMTQ8N4E7 242 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 SIDT2Q8NBJ9 832 aaKnown RBP8.28□□□□□ -1.08
DDB1-217ENST00000540166 PGAP3Q96FM1 320 aaPredicted RBP8.28□□□□□ -1.08
DDB1-217ENST00000540166 MND1Q9BWT6 205 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 C11orf16Q9NQ32 467 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 TAS2R7Q9NYW3 318 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 ASPDHA6ND91 283 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 KRBOX1C9JBD0 128 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 M0R129 80 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 SLC43A1O75387 559 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 OR56A5P0C7T3 313 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 RHOQP17081 205 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 SLC6A4P31645 630 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 KDELR2P33947 212 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 KIR3DL1P43629 444 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 EPHA5P54756 1037 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 SLC7A9P82251 487 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 CPSF6Q16630 551 aaKnown RBP eCLIP8.28□□□□□ -1.08
DDB1-217ENST00000540166 RNASE12Q5GAN4 147 aaKnown RBP8.28□□□□□ -1.08
DDB1-217ENST00000540166 CCNJQ5T5M9 372 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 TMEM81Q6P7N7 255 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 TMEM207Q6UWW9 146 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 RTL4Q6ZR62 310 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 RRM2BQ7LG56 351 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 OR10Z1Q8NGY1 313 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 FANK1Q8TC84 345 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 SELENOMQ8WWX9 145 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 IMP4Q96G21 291 aaKnown RBP8.28□□□□□ -1.08
DDB1-217ENST00000540166 DPAGT1Q9H3H5 408 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 CLCA2Q9UQC9 943 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 HTTP42858 3142 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 CLIC1O00299 241 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 ICAM2P13598 275 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 MC4RP32245 332 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 SLC19A1P41440 591 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 RPL34P49207 117 aaKnown RBP8.27□□□□□ -1.08
DDB1-217ENST00000540166 RPS14P62263 151 aaKnown RBP8.27□□□□□ -1.08
DDB1-217ENST00000540166 TSTA3Q13630 321 aaPredicted RBP8.27□□□□□ -1.08
DDB1-217ENST00000540166 SF3A2Q15428 464 aaKnown RBP8.27□□□□□ -1.08
DDB1-217ENST00000540166 RFTN2Q52LD8 501 aaPredicted RBP8.27□□□□□ -1.08
DDB1-217ENST00000540166 MPP7Q5T2T1 576 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 CNIH2Q6PI25 160 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 TMEM65Q6PI78 240 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 AFTPHQ6ULP2 937 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 USP45Q70EL2 814 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 VN1R5Q7Z5H4 357 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 LINC00469Q8N7U9 141 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 UXS1Q8NBZ7 420 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 OR52B6Q8NGF0 335 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 OR2T35Q8NGX2 323 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 SLC5A11Q8WWX8 675 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 OR8D1Q8WZ84 308 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 HSPA12BQ96MM6 686 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 SLC22A12Q96S37 553 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 TMEM45AQ9NWC5 275 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 ELOVL2Q9NXB9 296 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 NFKBIL1Q9UBC1 381 aaPredicted RBP8.27□□□□□ -1.08
DDB1-217ENST00000540166 ACTL7AQ9Y615 435 aa8.27□□□□□ -1.08
DDB1-217ENST00000540166 RANBP2P49792 3224 aaKnown RBP8.27□□□□□ -1.09
DDB1-217ENST00000540166 FPGTO14772 594 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 COX7A2P14406 83 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 HMGA1P17096 107 aaKnown RBP8.27□□□□□ -1.09
DDB1-217ENST00000540166 ADRA1AP35348 466 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 SLC6A11P48066 632 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 ARRB1P49407 418 aaPredicted RBP8.27□□□□□ -1.09
DDB1-217ENST00000540166 HNMTP50135 292 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 HTR6P50406 440 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 TCF15Q12870 199 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 HYAL2Q12891 473 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 EXOSC2Q13868 293 aaKnown RBP8.27□□□□□ -1.09
DDB1-217ENST00000540166 GTF2H2Q13888 395 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 KLHL22Q53GT1 634 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 GTF2H2CQ6P1K8 395 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 LETMD1Q6P1Q0 360 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 SYT12Q8IV01 421 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 STK40Q8N2I9 435 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 KRTCAP2Q8N6L1 136 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.27□□□□□ -1.09
DDB1-217ENST00000540166 RNF170Q96K19 258 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 HRASLS5Q96KN8 279 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 FOPNLQ96NB1 174 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 SMAD5Q99717 465 aaKnown RBP8.27□□□□□ -1.09
DDB1-217ENST00000540166 A0A1B0GVM2 712 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 NPC1O15118 1278 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 PTX3P26022 381 aaPredicted RBP8.27□□□□□ -1.09
DDB1-217ENST00000540166 GRK5P34947 590 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 CRATP43155 626 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 HSPA7P48741 367 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 TTPAP49638 278 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 MAP2K6P52564 334 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 DDX39BQ13838 428 aaKnown RBP8.27□□□□□ -1.09
DDB1-217ENST00000540166 CYHR1Q6ZMK1 362 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms