RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CLK4Q9HAZ1 481 aaKnown RBP15.91■□□□□ 0.14
COPS3-212ENST00000539941 THUMPD1Q9NXG2 353 aaKnown RBP15.91■□□□□ 0.14
COPS3-212ENST00000539941 SLC6A14Q9UN76 642 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 NAALAD2Q9Y3Q0 740 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 ARID1BQ8NFD5 2236 aaPredicted RBP15.9■□□□□ 0.14
COPS3-212ENST00000539941 SCN3AQ9NY46 2000 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 B4GAT1O43505 415 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 CER1O95813 267 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 SERPINA1P01009 418 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 ETFAP13804 333 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 CDH2P19022 906 aaPredicted RBP15.9■□□□□ 0.14
COPS3-212ENST00000539941 GPC1P35052 558 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 PRIM2P49643 509 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 TXNL4AP83876 142 aaKnown RBP15.9■□□□□ 0.14
COPS3-212ENST00000539941 FAM53BQ14153 422 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 ELOAQ14241 798 aaKnown RBP15.9■□□□□ 0.14
COPS3-212ENST00000539941 ATP6AP1Q15904 470 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 INAVAQ3KP66 663 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 HMBOX1Q6NT76 420 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 SLC23A3Q6PIS1 610 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 C6orf120Q7Z4R8 191 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 PRSS42Q7Z5A4 293 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 KMT5CQ86Y97 462 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 SUN3Q8TAQ9 357 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 FBXO30Q8TB52 745 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 BORCS5Q969J3 196 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 CHID1Q9BWS9 393 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 GAREM1Q9H706 876 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 MAP4K5Q9Y4K4 846 aa15.9■□□□□ 0.14
COPS3-212ENST00000539941 FITM1A5D6W6 292 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 H0YJX3 145 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 NUDT7P0C024 238 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 ARAFP10398 606 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 SLC5A2P31639 672 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 RAB38P57729 211 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 DSTNP60981 165 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 SQSTM1Q13501 440 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 LRRC36Q1X8D7 754 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 ENPP6Q6UWR7 440 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 SPRED1Q7Z699 444 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 GATAD2AQ86YP4 633 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 CA13Q8N1Q1 262 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 OR4K14Q8NGD5 310 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 ADAMTS18Q8TE60 1221 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 EME1Q96AY2 570 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 SLC47A1Q96FL8 570 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 PYURFQ96I23 114 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 ASPSCR1Q9BZE9 553 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 CEPT1Q9Y6K0 416 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 BLACEA4D250 179 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 WASHC1A8K0Z3 465 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 DEAF1O75398 565 aaPredicted RBP15.89■□□□□ 0.13
COPS3-212ENST00000539941 PRKD3O94806 890 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 LDLRP01130 860 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 ZNF23P17027 643 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 CD1CP29017 333 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 ANXA11P50995 505 aaKnown RBP15.89■□□□□ 0.13
COPS3-212ENST00000539941 TUBA4AP68366 448 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 HSD11B2P80365 405 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 EEF1A2Q05639 463 aaKnown RBP15.89■□□□□ 0.13
COPS3-212ENST00000539941 SCARB2Q14108 478 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 THOC7Q6I9Y2 204 aaKnown RBP15.89■□□□□ 0.13
COPS3-212ENST00000539941 USP53Q70EK8 1073 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 EIF3MQ7L2H7 374 aaKnown RBP15.89■□□□□ 0.13
COPS3-212ENST00000539941 PRSS41Q7RTY9 318 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 AMIGO2Q86SJ2 522 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 CCDC116Q8IYX3 515 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 LRRC25Q8N386 305 aaPredicted RBP15.89■□□□□ 0.13
COPS3-212ENST00000539941 OR56A1Q8NGH5 318 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 FAM110BQ8TC76 370 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 TANKQ92844 425 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 CCDC74AQ96AQ1 378 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 CSF3RQ99062 836 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 BDH2Q9BUT1 245 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 A4GALTQ9NPC4 353 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 C8orf4Q9NR00 106 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 STARD5Q9NSY2 213 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 FAM32AQ9Y421 112 aaKnown RBP15.89■□□□□ 0.13
COPS3-212ENST00000539941 ZNF451Q9Y4E5 1061 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 V9GYQ6 96 aa15.89■□□□□ 0.13
COPS3-212ENST00000539941 ZNF860A6NHJ4 632 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 CYR61O00622 381 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 TOX3O15405 576 aaPredicted RBP15.88■□□□□ 0.13
COPS3-212ENST00000539941 TPST1O60507 370 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 NSA2O95478 260 aaKnown RBP15.88■□□□□ 0.13
COPS3-212ENST00000539941 FHP07954 510 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 SYPP08247 313 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 MSL3P1P0C860 447 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 FEN1P39748 380 aaKnown RBP15.88■□□□□ 0.13
COPS3-212ENST00000539941 ARL4DP49703 201 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 PRR5P85299 388 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 CDK6Q00534 326 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 CFHR1Q03591 330 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 C16orf72Q14CZ0 275 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 AMZ1Q400G9 498 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 CEACAM20Q6UY09 585 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 CBLL1Q75N03 491 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 METTL25Q8N6Q8 603 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 FAM86B1Q8N7N1 296 aa15.88■□□□□ 0.13
COPS3-212ENST00000539941 Q8N9G6 341 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms