RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 MBOAT4Q96T53 435 aa21.11■□□□□ 0.97
HOMER3-204ENST00000539827 TESMINQ9Y4I5 508 aa21.11■□□□□ 0.97
HOMER3-204ENST00000539827 VCANP13611 3396 aa21.11■□□□□ 0.97
HOMER3-204ENST00000539827 TMEM247A6NEH6 219 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 LDB3O75112 727 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 RRM2P31350 389 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 ARHGDIAP52565 204 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 OR1D5P58170 312 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 PRR5P85299 388 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 DUSP7Q16829 419 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 C6orf132Q5T0Z8 1188 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 LYSMD4Q5XG99 296 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 ARMC8Q8IUR7 673 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 ANKHQ9HCJ1 492 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 PDP1Q9P0J1 537 aaPredicted RBP21.1■□□□□ 0.97
HOMER3-204ENST00000539827 TMEFF2Q9UIK5 374 aaPredicted RBP21.1■□□□□ 0.97
HOMER3-204ENST00000539827 SH3GLB1Q9Y371 365 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 KCNE3Q9Y6H6 103 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 SPACA6W5XKT8 324 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 MED26O95402 600 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 CD247P20963 164 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 CTSKP43235 329 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 BNC1Q01954 994 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 MAMSTRQ6ZN01 415 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 ARHGEF39Q8N4T4 335 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 OR7G2Q8NG99 324 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 GEMIN6Q8WXD5 167 aaKnown RBP21.1■□□□□ 0.97
HOMER3-204ENST00000539827 RSPO3Q9BXY4 272 aaPredicted RBP21.1■□□□□ 0.97
HOMER3-204ENST00000539827 GABARAPL1Q9H0R8 117 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 THUMPD1Q9NXG2 353 aaKnown RBP21.1■□□□□ 0.97
HOMER3-204ENST00000539827 CLCA2Q9UQC9 943 aa21.1■□□□□ 0.97
HOMER3-204ENST00000539827 IGHV5-51A0A0C4DH38 117 aa21.09■□□□□ 0.97
HOMER3-204ENST00000539827 H0YAE9 185 aa21.09■□□□□ 0.97
HOMER3-204ENST00000539827 CYR61O00622 381 aa21.09■□□□□ 0.97
HOMER3-204ENST00000539827 MITFO75030 526 aaPredicted RBP21.09■□□□□ 0.97
HOMER3-204ENST00000539827 MFN2O95140 757 aa21.09■□□□□ 0.97
HOMER3-204ENST00000539827 MLLT3P42568 568 aaPredicted RBP21.09■□□□□ 0.97
HOMER3-204ENST00000539827 PRTGQ2VWP7 1150 aa21.09■□□□□ 0.97
HOMER3-204ENST00000539827 USP53Q70EK8 1073 aa21.09■□□□□ 0.97
HOMER3-204ENST00000539827 USP51Q70EK9 711 aa21.09■□□□□ 0.97
HOMER3-204ENST00000539827 ZNF300Q96RE9 604 aaPredicted RBP21.09■□□□□ 0.97
HOMER3-204ENST00000539827 AMBRA1Q9C0C7 1298 aa21.09■□□□□ 0.97
HOMER3-204ENST00000539827 SOHLH2Q9NX45 425 aa21.09■□□□□ 0.97
HOMER3-204ENST00000539827 A0A0A6YYC8 382 aaPredicted RBP21.08■□□□□ 0.97
HOMER3-204ENST00000539827 I3L1I5 382 aaPredicted RBP21.08■□□□□ 0.97
HOMER3-204ENST00000539827 J3KTA2 159 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 FGF17O60258 216 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 RECKO95980 971 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 CPMP14384 443 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 RXRGP48443 463 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 DAPP51397 102 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 IL1RL1Q01638 556 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 WDR53Q7Z5U6 358 aaPredicted RBP21.08■□□□□ 0.97
HOMER3-204ENST00000539827 GALNT5Q7Z7M9 940 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 CYP4Z1Q86W10 505 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 GPR32P1Q8NGA4 272 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 RDH12Q96NR8 316 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 COL21A1Q96P44 957 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 OR7D2Q96RA2 312 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 FAM118AQ9NWS6 357 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 PCDH15Q96QU1 1955 aa21.08■□□□□ 0.97
HOMER3-204ENST00000539827 H3BNH8 94 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 SRPX2O60687 465 aaPredicted RBP21.08■□□□□ 0.96
HOMER3-204ENST00000539827 PDE9AO76083 593 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 PORP16435 677 aaPredicted RBP21.08■□□□□ 0.96
HOMER3-204ENST00000539827 HOXA6P31267 233 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 ANXA11P50995 505 aaKnown RBP21.08■□□□□ 0.96
HOMER3-204ENST00000539827 RAB38P57729 211 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 FUT5Q11128 374 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 SHBQ15464 509 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 FAM111BQ6SJ93 734 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 HMGN2P46Q86SG4 172 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 WDR5BQ86VZ2 330 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 SLC35F3Q8IY50 421 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 SAMD14Q8IZD0 417 aaPredicted RBP21.08■□□□□ 0.96
HOMER3-204ENST00000539827 ZNF786Q8N393 782 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 SIMC1Q8NDZ2 872 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 RMND5BQ96G75 393 aaPredicted RBP21.08■□□□□ 0.96
HOMER3-204ENST00000539827 AHCYL2Q96HN2 611 aaKnown RBP21.08■□□□□ 0.96
HOMER3-204ENST00000539827 MUS81Q96NY9 551 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 TREX2Q9BQ50 279 aaPredicted RBP21.08■□□□□ 0.96
HOMER3-204ENST00000539827 ERVMER34-1Q9H9K5 563 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 THSD1Q9NS62 852 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 IRAK4Q9NWZ3 460 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 MYRFQ9Y2G1 1151 aa21.08■□□□□ 0.96
HOMER3-204ENST00000539827 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 A0A0C4DFX4 3053 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 CCDC163A0A0D9SF12 145 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 TLCD2A6NGC4 264 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 CHST10O43529 356 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 H6PDO95479 791 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 CHRM4P08173 479 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 GIMD1P0DJR0 217 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 GABRA4P48169 554 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 SPIBQ01892 262 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 KCNAB2Q13303 367 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 TTC33Q6PID6 262 aaPredicted RBP21.07■□□□□ 0.96
HOMER3-204ENST00000539827 Q8N9G6 341 aaPredicted RBP21.07■□□□□ 0.96
HOMER3-204ENST00000539827 MIPOL1Q8TD10 442 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 GIMAP5Q96F15 307 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms