RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 SAMD14Q8IZD0 417 aaPredicted RBP11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 KRTCAP2Q8N6L1 136 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 ADCY4Q8NFM4 1077 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 OR7A2PQ8NGA2 310 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 SUN3Q8TAQ9 357 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 ACTRT2Q8TDY3 377 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 THAP3Q8WTV1 239 aaPredicted RBP11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 CIDECQ96AQ7 238 aaPredicted RBP11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 PPCDCQ96CD2 204 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 FBXL20Q96IG2 436 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 ART5Q96L15 291 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 BBS4Q96RK4 519 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 DEFB126Q9BYW3 111 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 SLC25A18Q9H1K4 315 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 CDCP1Q9H5V8 836 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 MAT2BQ9NZL9 334 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 SH3BP4Q9P0V3 963 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 ATP6V1HQ9UI12 483 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 ZNF451Q9Y4E5 1061 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 PCDHGB7Q9Y5F8 929 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 ZFAND5O76080 213 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 ZIC2O95409 532 aaPredicted RBP11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 TGDSO95455 350 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 IGKV3-11P04433 115 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 SFTPCP11686 197 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 SSTR4P31391 388 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 HPCAL1P37235 193 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 IDH3AP50213 366 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 AQP5P55064 265 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 CLDN8P56748 225 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 MAP4K2Q12851 820 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 MFAP5Q13361 173 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 LSM12Q3MHD2 195 aaKnown RBP11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 ZNF628Q5EBL2 1059 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 C6orf163Q5TEZ5 329 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 TMEM198Q66K66 360 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 ASB18Q6ZVZ8 466 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 R3HCC1LQ7Z5L2 792 aaKnown RBP11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 RIMKLAQ8IXN7 391 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 FAM9CQ8IZT9 166 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 OR9A2Q8NGT5 310 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 CEP70Q8NHQ1 597 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 RFWD2Q8NHY2 731 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 MTERF3Q96E29 417 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 ZNF764Q96H86 408 aaPredicted RBP11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 MARK4Q96L34 752 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 ZNF354BQ96LW1 612 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 EBF4Q9BQW3 602 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 GLIPR2Q9H4G4 154 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 CCDC134Q9H6E4 229 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 ANKRA2Q9H9E1 313 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 LIN28AQ9H9Z2 209 aaKnown RBP11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 SLAMF7Q9NQ25 335 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 AIG1Q9NVV5 245 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 COPS7AQ9UBW8 275 aa11.82□□□□□ -0.52
TSPAN9-207ENST00000539631 TMEM200CA6NKL6 621 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 ANKRD28O15084 1053 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 PDPK1O15530 556 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 ALPPP05187 535 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 VIMP08670 466 aaKnown RBP11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 PCSK2P16519 638 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 EFNA1P20827 205 aaPredicted RBP11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 PRPS1L1P21108 318 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 S1PR1P21453 382 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 NTSP30990 170 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 MPIP34949 423 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 RPL3P39023 403 aaKnown RBP11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 CD97P48960 835 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 NCBP2P52298 156 aaKnown RBP eCLIP11.81□□□□□ -0.523e-8■■□□□ 11.6
TSPAN9-207ENST00000539631 NME5P56597 212 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 SLC37A1P57057 533 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 RNF4P78317 190 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 MRPS35P82673 323 aaKnown RBP11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 FUT7Q11130 342 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 EXOSC7Q15024 291 aaKnown RBP11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 MEP1AQ16819 746 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 TRMT12Q53H54 448 aaKnown RBP11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 SOWAHCQ53LP3 525 aaPredicted RBP11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 ACER2Q5QJU3 275 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 ABHD17BQ5VST6 288 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 IGFL2Q6UWQ7 119 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 HSDL2Q6YN16 418 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 RNF111Q6ZNA4 994 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 C16orf47Q6ZP98 133 aaPredicted RBP11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 ACAD11Q709F0 780 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 RPS19BP1Q86WX3 136 aaKnown RBP11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 C9orf40Q8IXQ3 194 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 VWA5B2Q8N398 1253 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 SLC5A8Q8N695 610 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 ZNF615Q8N8J6 731 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 LSM14AQ8ND56 463 aaKnown RBP11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 SIMC1Q8NDZ2 872 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 SLC39A7Q92504 469 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 KAT2AQ92830 837 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 CTHRC1Q96CG8 243 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 AMDHD1Q96NU7 426 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 LMF1Q96S06 567 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 DPY30Q9C005 99 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 OR10A5Q9H207 317 aa11.81□□□□□ -0.52
TSPAN9-207ENST00000539631 EPS8L2Q9H6S3 715 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms